eif5b (eif5b)


Basic Information

Item Value
gene id eif5b
gene name eif5b
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 11376489 ~ 11400006 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007253113.3
CCATATGCGCTAAGCAGTGACTTACAGCACACGGCAACGAGGGGAGATACTGCTacagcacacacatacacaccatgggaaagaaacagaaaaataaaggagACGATGGtgcCAAAGAAGACGGCATCGACATTGATGCCCTTGCAGCTGAGATTGAGGGAGCTGGAGCCTCCAAGGAACAGGGCAAAGGAAAGGGCAAAAAGAAGAAAGGAGGGAAGAAAGAGGACTATGATGAGGATGACATCCTGAAAGAACTGGAGGAATTATCACTTGAAAACCAAGGTGGAAAAGGAAAAGAGCCACCTAAGAAATCCGATTCTATAGAGGAACCGGAACCCCAGCCTGCGCTGACAAAAGCCGAGAAAAAGAAGGCCAAAAAGGGCAAGCGCGTTAGCCCAGAGGATGAGGATGGTGAAGAAGATCAGACTAAGGGTGACATGGAAAATGAAAGCCAGGCAAAGGGCAAGAAGGCGGTGGcggctcctgctgctgctcctgctgcttcCGACTCTGAGGACGAAGGCTCGCAATCAAGACAGAAAGCCAAGGCTGGAAAGACAGGAGGCAAAAAGGGAGCGTCCGACTCTGAGGACGACAATGAAGGTAAAGGTGCGAAAAAGGGCGGCAGAGGCGCAGCCGAAGAAAGCGATCAGTCAGACGACGACTCCCAAGCCACCcgcaagcagaagaagaaaggaaaagcaAAGGCGAAGGTCGAAAGTGACAACGAGGAAGAGGGAGAAGATGAAGGCACCTTCAAGATAAAGACGGCAGCGCAGAAGAAAGCagagaagaaggagagggaccggaagaagaaggaggaggagagggcaAAGTTGAGAGCcaagaaggagaaagaggaggagttgGCCAAGAAGGATGTGGCTAAGAAAGAGGTGACCAAGGGtcctgcagctccgcccacgGAAACCAAACAGGTGGAGGCAGCTGCGCCTGAAGAACCAGAGGGAGCTGAAGATGATGATGATGGggacaagaagaagaaagacaagaagaagaaaaagggagagaaggaagagaaagaaaagaagaagggCCCTAGCAAAGCCACTGTGAAGGCCATGCAGGAGGCTCTGGCCCGGatgaaggaggaggaagagcgggccaaaagagaggaagaggagagggagaggcGCCTGGCAGAGCTGGAAGCACAGAGACTAGAGCAGGAACGTTTGGAAGCAGAGcggaaggagaagaagaagcaaaAGGACAAGGAAAGGAAGGAGAGGATGAAGAAGGAGGGCAAGCTGCTCACCAAGGCACAGAAAGAGTCTCGAGCCAGAGCGGAGGCCACACTGCGTGCACTGCAGGCCCaggGTGTTGAAGTGCCATCCAAAGACTCAATGCCAAAGAAAAGGCCTATTTACTCCGACAAGAGGAAAAAGAAGCCAGCAGCACAAACTCCTGAAGAAACCTCAGAAGTGACATCGCCCACATCAGAGGTGGCTGAGCCAATCATGACGAAGATGGAAGTGGATGCTCCCAAAGATGAGCCAGCGGCTGAACCGAGTGCTGAGGCTGCAGATTTGGATGACTGGGAGGCCATGGCTAGTGATGAGGAGAGGGAGCTAAAGAAGGTCCATATCGAAGTAAAGGAGACAAAGGCCTCTCAGCCAGCCCACAAATCCTCCGCTCCTGCCAAGCAGGAGAACGGCAGCGAAgacgaggaggaggacgaggaggatgaagaagatgaGGATGAAGAAGATGAGGAAGAGGGTGAGGAGGAgagtgaagaggaggaggaggaggagaaggagaccCAAACAGCAAAGACGAAAAGTAAAAAGGAGGTGAGCTCGGAGTCCAGCAGCGAGAGCGACTCAGACGACGAACGCACCAAAGAGGAGAGGCTCTACGACAAGGCCAAGAGACGGATAGAGAAACGCAGACAGGAGAACCTGAAGAACATTAACTTGGACAAGTTGAGAGctcctgtggtgtgtgtgctgggGCATGTAGACACAGGAAAGACCAAGATCCTGGATaagCTCCGACACACACATGTACAAGATGGTGAGGCAGGTGGGATCACTCAGCAGATTGGTGCTACCAATGTTCCACTGGACACCATTGTTGAGCAGACTAAGATGGTGAAAAACTTTGACAGAGAAACTATAAAGATTCCGGGAATGCTGATCATTGACACACCAGGACACGAGTCCTTCGGgaatcTGAGGAACAGAGGAAGCTCCCTGTGTGACATTGCGATTCTGGTGGTGGACATCATGCACGGCCTGGAGCCTCAGACTATTGAATCCATCAATCTGCTAAAAGAGAAGAAGTGCCCCTTCATTGTAGCCCTAAACAAGATTGACCGTCTCTATGACTGGAAGAAAGGGCCCGAGACAGATGTGGTGGCCACTttgaagaagcagaagaagaacacTAAGGATGAGTTTGATGAGCGAGCCAAAGCTATCATTGTAGAGTTTGCTCAGCAGGGTTTGAACGCTGCTCTTTTCTATGAAAATAAGGACCAACGAACCTTCGTATCTTTGGTGCCCACTTCTGCCCATTCAGGTGATGGCATGGGTAACCTAATTGCTCTTCTGGTTGATCTTACCCAGACCATGCTGGCCCGTAGGCTAGCCCACTGTGACGAGCTCCGCGCACAAGTCATGGAGGTGAAGGCTCTGCCTGGTATGGGCACTACGATAGATGTGATCTTGATTAATGGTCGTCTGCGTGAAGGTGAGACCATCATAGTTCCAGGCGTGGAGGGACCCATAGTCACCCAGATCAGAGGACTGCTGCTACCCCCTCCGCTTAAAGAGCTCCGAGTCAAGaatCAGTACGAGAAGCATAAGGAGGTGTGTACCTCTCAGGGAGTGAAGATTCTTGGAAAGGATCTGGAGAAGACATTAGCAGGCCTGCCGCTACTGGTGGCCCACAAAGAGGATGAAGTCCCTGTACTGAGGGACGAACTGGTCAGGGAGCTTAAACAGACGCTGAATGCGATTAAACTGGAGGAGAAGGGTGTGTATGTGCAGGCCTCAACCCTGGGTTCCCTGGAAGCTCTGCTAGAGTTCTTGCGCACATCCAAAGTGCCTtaTTCTGGCATTAATATCGGCCCTGTCCATAAGAAAGACGTCATGAAGGCATCTACCATGCTGGAGCACGACCAACAgtatGCTGTGATTCTTGCGTTTGATGTCAAAATTGAGAGAGAGTCTCAGGAGATGGCTGACAGTCTGGGCGTTCGGATCTTCAGTGCTGAGATCATTTATCATCTGTTCGATGCCTTCACCAAATACAGAGAGGACTACAAGAAGCAGAAACAGGACGAGTTCAAGCACATAGCAGTGTTTCCCTGTAAGCTGCGTATCCTGCCTCAGTTCATCTTTAATTCCAGAGACCCCATTGTTATGGGCGTGACTGTAGAGGCTGGAGTACTGAAGACTGGCACCCCACTGTGTGTGCCCAGCAAAGGGTTTGTAGACATTGGCATTGTGACCAGTATCGAGGTCAACCATAAACCTGTGGACACAGCTAAGAAGGGCCAGGAGATCTGCATTAAGATCGAGCCTATTCCTGGAGAGTCGCCCAAGATGTATGGCCGACACTTTGAGGCGGTTGATATCATAGTTAGCAAGATAACTCGTGCATCAATCGACGCCCTGAAGAACTGGTTCCGAGATGAAATGCAGAAGTCGGACTGGCAGCTGATCATGGAGCTGAAGAAGACTTTTGAAATCATCTGAGAGCGCACAGTGACTTCTTAACTGACCTACGAGCGGAgacgaccacacacacacacacacaaaaccaacCATACTATGCGCACTCCTGAGTTCATCTGTGGTCAAGGAGTCCTCTAAGTGTTGCTACTAGTTTCTTACAAATGATACGAACGTTTCTTTTTCCACAAACCTGCGGGAGGAAACGAGTGGAGGTGTGCAAGGTCAAGCACACGCCCTTCTCCCTTTCCCCTCCATCTCCCTGGGAGTGGTGGAGagcacaaaaaaagagaaaaaaagcataaaaaagtgaaaaagatgAAAGTGTTTTTCTGTGAGAAACTGAACTATTACCACTGTTTTAACAGTGACCtgttagacaaaaaaaaaggttagagAAACATTTACACACTATTCCAAACGTGCCTGTTCTTTCTGATCTATCAGTTTCCCTCAATTTACAGCTGCTGCTTGGAACGGACATCCCTGCAAACTCCAGGCTGGAGCTGTGCTGTGTTGGAGCAGTTCATCCACAAGTGCTAATGTGGctaatagtaaataataaagttcATAAGCACCAGTAATTAAGGTTTGAGTGATGCTAGAGGTGGCTCGTTTTGACTGTAAttattagcaacattagcacCAAGAAAGACATAATTCATACACACATGGTGATCTGGCTAACtaatgtgtaaatgaaaaatcAAGGAGAACCCTTTAGAGCATGGTTTTGTTTGAATAATGCTAACTGGCTTCTGTTGGCAGTAAtttttagcagcattagcattaagtGAAAGAGAATGTGTCCAACCATTTAAATCCTGCCAACTCTAAATTAAGAATAAAGGGAACCCCTTAGCATGGTCTTGTTTGAGTCATGCTAACAGGATTCTATTGACAGTAAATAATAGCAGCATTAACTTTAAGTGAGAAGTAATTTCTCCAAACATGCTAATCTGGCTAACTAAACATGAAAGTTAAGGGGAACCTTGTAGCATGGTGTTGTTTGAGTAATGCTAACTGGTTTTGTTGGCTATAAttttagcaacattagcatcaatcaataaataattgATACAGACAATTTAATTTGGCTAAGTTCTGTATTAATGAAAAGTAAGGAGAACCCTCAGAATGATCTGGCTTGTGTAATGCTAACTGGCTCCTGTTGGCTGTAATTTAAGCCACGTTAGCATTTAATGAGAAGACCATGTTTTTCCAAACATGCTAATCTGGCTAATTGTAAATGAAAGTTAAGGAGAACCctttagcattgtcttgtttgAGTAATGCTAACTGGCTTCTGTTGGCTTTAATTTGAGCAATGTTAGCATCGAGTGAGGAACagtttatttgtacattttaatctGGCTTTAATTAAGTATTTGGGAACCTTTTTTGAACAACGCTAAGCAGCTCCTCTTAactacatttattaataatctaAGCAACAGTTTGTGTAGTTTGTCTAAAATGCTGTGTTAATGTAAACCACGAAAGTCTAACTGTCTGGTTTCTTTTTCATTATGAttattagcaacattagcatgcTCGGATGAAGTATTCCTTTGAAATGTATTGCCAGGCTATTTTCCAGGCTTTGTTCTAGCCTGGTCAGTGTGTGAAACGCACTGGGCAGGTGGGCTACGCCAAAACTATGGGATGTAGCAGAgagaaaacacaacagaaagTGTGAGGTTTAGCTTGTTGAGTTTAGCTGGgctctaaaaaaaatgtctgaaaaataaacttaaccatgtcagtgtttcttttttccccccccTCATTGATATTTTCCTCCTTGGCCCTCGAATGCAGGTCTTTTATCCTCCTTTTTGAAGTACATCTATATAGGTCGGTATCATGAGTCCTTTGCCACAGCTCTCTTGAATCTGCCTTGTGCCTGTTGTTGTCTTTGCCTAGTGAGAGAAATTGTGCGCAAGCTGGGTTAAAGGCATCCCTTGACTTAAATGGAGATTTCAAATCAGAATCAATAAAGAGATGGCATATTTATAGACATGTTTGTATTTGGAAATTGTATTTGGTATTTGTTCATAATTAGGATATTGTTACTTGCTTGCTGCATGTACTTTACCTAGCCCAATTGTTCCAGAAACAACATAGTTTAAGTTGCTCTACCATTAAAAATAGGGGTACAGTGTGCTTTGATGTTTTGGGGAACCTAGCCTATATAAGACTTTGAAAACATGCAGTGATTTTTGTAAACTTTCCAATGATTGAGAGTTAGAATAATACCAGAGTAATTGAACTTTTGTAATATGTACAAATATCAAAGACTGGAAatgtttgatatatttttttcaattgtacTATCCATgaatttaagtgtatttatttatttttcccccagatattttttttagatctagCTTGTAATTCACTCTTACATTTAGCAAGCTTAAGATTCCACACAAGTGGGCACTGTTATTGCTCCAATAGCTTTTGCTGCTTCGTAAGAGTGGTGCTTTGCAACAGTGACACTGTGTTGTACACTTCTTATTAAAGCATCCACCATGATTTA

Function

symbol description
eif5b Predicted to enable translation initiation factor activity. Predicted to act upstream of or within translational initiation. Orthologous to human EIF5B (eukaryotic translation initiation factor 5B).

NR:

description
PREDICTED: eukaryotic translation initiation factor 5B isoform X2

GO: NA

KEGG:

id description
K03243 EIF5B; translation initiation factor 5B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007253113.3 True 6249 mRNA 0.46 24 11376489 11400006

Neighbor

gene id symbol gene type direction distance location
lipt1 NA coding upstream 1170 11373667 ~ 11375319 (+)
pkn1 LOC108428230,LOC107603033,LOC107712223,LOC107561874,LOC107676851 coding upstream 103486 11197689 ~ 11273003 (+)
LOC103038803 prr36,LOC107382350,LOC103150089,LOC106941305,LOC106515293 coding upstream 190652 11151317 ~ 11185837 (+)
LOC103039116 mcoln1,LOC108428233,LOC107561871,LOC107676888,LOC107603030,LOC107718592,LOC106588379 coding upstream 233663 11119383 ~ 11142826 (+)
trappc5 trappc5,LOC107692146,LOC107712234,LOC107676838 coding upstream 260563 11112593 ~ 11115926 (+)
LOC103036596 arhgef7,arhgef7b,LOC107718510,LOC107567796,LOC107746262 coding downstream 4238 11404244 ~ 11450384 (+)
LOC103035965 sox1 coding downstream 231727 11631733 ~ 11633775 (+)
LOC111193615 mcf2l coding downstream 586913 11986919 ~ 11996727 (+)
arl11 NA coding downstream 656104 12056110 ~ 12058454 (+)
LOC103032463 NA coding downstream 957024 12357030 ~ 12378962 (+)
G102633 atp5h,LOC103037520,LOC102207628,LOC103369154 non-coding upstream 3664 11368038 ~ 11372825 (+)
G102620 NA non-coding upstream 60699 11310627 ~ 11315790 (+)
LOC111193530 NA non-coding upstream 66804 11307142 ~ 11309685 (+)
G102621 NA non-coding upstream 75522 11299454 ~ 11300967 (+)
G102618 NA non-coding upstream 115452 11259422 ~ 11261037 (+)
G102638 NA non-coding downstream 44257 11444263 ~ 11444514 (+)
G102648 NA non-coding downstream 120664 11520670 ~ 11520911 (+)
G102652 NA non-coding downstream 159404 11559410 ~ 11559897 (+)
LOC111193531 NA non-coding downstream 190117 11590123 ~ 11672512 (+)
G102654 NA non-coding downstream 199057 11599063 ~ 11599504 (+)
map2k7 map2k7,LOC107676852,LOC107712243 other upstream 81674 11274746 ~ 11294815 (+)
LOC111193528 NA other upstream 506333 10868577 ~ 10870156 (+)
G102411 LOC107747660 other upstream 850329 10525677 ~ 10526160 (+)
LOC103025691 NA other upstream 2540408 8797745 ~ 8836081 (+)
cab39l cab39l,LOC107676861,LOC107718429 other downstream 600633 12000639 ~ 12024764 (+)
cryzl1 cryzl1 other downstream 1083616 12483622 ~ 12522303 (+)
sh3pxd2a sh3pxd2a other downstream 1450995 12851001 ~ 13032506 (+)
G103376 zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776 other downstream 2529059 13929065 ~ 13935667 (+)
G103490 LOC106510829 other downstream 2860619 14260625 ~ 14261539 (+)

Expression


Co-expression Network