hikeshi (hikeshi,LOC106574699)


Basic Information

Item Value
gene id hikeshi
gene name hikeshi,LOC106574699
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 19792874 ~ 19798191 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254832.2
TTCCAGCAGCTGCTGCTGAAGCGCGGTGTGGGAGAAACACGAGCACCAGCGACCCGCAGCATGTCTGATCTACCCCCGCCGTGACCCGCAGAGCCCCACAGTCATGACTGGATCTTTACTGAGACtccattagtttattattataaatctgcaGAACGAGCTGCTCCTCGGCTCTCCGCGCTCAGTATTGATCATGTTCGGATGTCTGGTTGCGGGCAGATTGGTCCAGACAGATGCTCAGCAGGTGGCGAGCGACAAGTTTGTGTTTAACCTGCCGGACTATGAAAATGTTAACCACATCGTGGTCTTTATGCTGGGTACAGTGCCTTTTCCCGCTGGCATGGGCGGTGCCGTCTACTTCTCTTTTCCTGACCCCAACGTAGGGCAGGTGTGGCAGCTCCTCGGCTTCATAACCAATGAAAAGCCAAGTGCCATATTCAAAATATCTGGCCTGAAAGCCGGTGAGGGTGGGGCCCATCCGTTTGGGATGATGGCTGCCCCTCAGGCCCCCTCGGTGGCCCAGGTTGGCGTGTCCATTGAGGCCCTGGATCAGCTAGCACAACAGACGCCTGTGTCCAGCGCAGCTGTCTCCACCATGGACTCCTTtacacagTTCACACAGAAGATGCTGGAGAGTCTGTACAACTTTACCTCCTCCTTCGCTCTGTCACAGTCTCAGATGACGCCAAACCCTTCGGAAATGTACGTTCCTGCCAGTTCCATCCTTAAATGGTATGAAAACTTTCAAAGGCGAATGGTGCAGAATCCAAACTTCTGGAAGACGTGACCTGCTTTTTTTTGGAAAGTTACTGATTACCAGAACGGCCAatagttaaaaatattattgtacACTAAGACATAAAGACATTTTGTGCTGTACCATCCTTGCAAAATGCAATTTTATATCCCTTACTGCACTGCAGTATTAAATGCagtattactgattttttttaatgatatagaCAGTGGGTGATGTGTTTTTGATTGGTGATCATTTTGATTTGATCTAAAGAAcaatttctgttctgttctaagCGTATTCATTGATCTTGTTTGTAAAAGGCCTTCTTACCCTGCGTCACAATCGGCTGCAATTGTTTGATTTCTTTTTGTGCTTTGGACAAGAGATACCAAATCTTTATCACTCCATATTCATGGTCAACTttctaaaacaataaacagatggCTGCTTTTAAA

Function

symbol description
hikeshi Predicted to enable Hsp70 protein binding activity and nuclear import signal receptor activity. Predicted to be involved in cellular response to heat and protein import into nucleus. Predicted to act upstream of or within protein transport. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 13. Orthologous to human HIKESHI (heat shock protein nuclear import factor hikeshi).

NR:

description
PREDICTED: protein Hikeshi

GO:

id name namespace
GO:0006606 protein import into nucleus biological_process
GO:0034605 cellular response to heat biological_process
GO:0005829 cytosol cellular_component
GO:0005634 nucleus cellular_component
GO:0030544 Hsp70 protein binding molecular_function
GO:0008565 obsolete protein transporter activity molecular_function

KEGG:

id description
K23327 HIKESHI; protein Hikeshi

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254832.2 True 1197 mRNA 0.47 5 19792874 19798191

Neighbor

gene id symbol gene type direction distance location
eed eed coding upstream 1270 19780955 ~ 19791604 (+)
cep97 cep97 coding upstream 65766 19713576 ~ 19727108 (+)
LOC103039009 NA coding upstream 89452 19688960 ~ 19703422 (+)
LOC103039332 LOC108429797,LOC108258862 coding upstream 108724 19660005 ~ 19684150 (+)
LOC103026741 LOC108429797 coding upstream 144763 19623428 ~ 19648111 (+)
ccdc81 NA coding downstream 1402 19799593 ~ 19822020 (+)
prss23 prss23,LOC107570079,LOC106575973 coding downstream 80584 19878775 ~ 19884491 (+)
LOC103043041 LOC108429787 coding downstream 283691 20081882 ~ 20145614 (+)
dusp27 dusp27,LOC102309085 coding downstream 355214 20153405 ~ 20165191 (+)
LOC103043852 pou2f1 coding downstream 371735 20169926 ~ 20197233 (+)
LOC111193552 NA non-coding upstream 10188 19782129 ~ 19782686 (+)
G104891 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676 non-coding upstream 82060 19706646 ~ 19710814 (+)
G104841 NA non-coding upstream 102285 19690100 ~ 19690589 (+)
G104811 NA non-coding upstream 232283 19560033 ~ 19560591 (+)
G104809 fdx1,LOC108434718,LOC108259004,LOC102789999 non-coding upstream 233885 19543703 ~ 19558989 (+)
G104921 NA non-coding downstream 15192 19813383 ~ 19863419 (+)
G104944 NA non-coding downstream 148652 19946843 ~ 19947441 (+)
G104950 NA non-coding downstream 198388 19996579 ~ 20008771 (+)
G105007 NA non-coding downstream 404444 20202635 ~ 20202939 (+)
G105008 NA non-coding downstream 405003 20203194 ~ 20205750 (+)
nfkbiz nfkbiz other upstream 47950 19734226 ~ 19744924 (+)
G104656 pcdh8 other upstream 869671 18919060 ~ 18923203 (+)
LOC111193547 NA other upstream 2373736 17406595 ~ 17419138 (+)
LOC103031769 prps2 other upstream 2653901 17119847 ~ 17138973 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 2898282 16888386 ~ 16894592 (+)
G105276 NA other downstream 1191082 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other downstream 1220847 21019038 ~ 21028990 (+)
G105357 NA other downstream 1529001 21327192 ~ 21369204 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other downstream 2456894 22255085 ~ 22283453 (+)
LOC103045705 LOC107725350,LOC107692700,LOC108439093,LOC107565240,LOC108441473 other downstream 2727066 22525257 ~ 22588961 (+)

Expression


Co-expression Network