LOC103032094


Basic Information

Item Value
gene id LOC103032094
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 17113310 ~ 17117221 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259037.3
AGTAAGAGCTGCTTTACTGTTCAGCTGCCTGAGAGGACAGAGCTACAGTAAACATGGAGGCCGGTTTCACTGAGGGGGAGTTTTACCAGGACCACTTCGACTCCAGAGCTTATATTAACATCTTCTTCTCCAGTCCTGAAGGACACTCAGACGAGAAGAGTCTCCTCGTGTTCGTGTTAGACGCTCTCAGCAGAACTTTCTCAGGAGGTAAATACAGCGGTCAGAAACTGGTAGAGGTGGGCTCTGGACCCACCATTCACAGCATTATCAGCGCCTCTGAGCATTTTCAGGAGATCACCTTGTCAGATTACGCTGAAAGGAATCTGGAGGAAATCCAGAAATGGCTGAGAAATGAGGAAGGCTGTTTCAACTGGAATCCCGTGATCGAGTATATCTGCAAACTGGAGAAGAAAAGCCCATCAGAAGTGGAAGCTAAAATAAGGCAAAGGGTGAAACACATCCTGAAGTGCGACGTCCGGCTGGAAAATCCATTCCACCCTGAAAACCTGAAGCCAGCAGACTGCGTGATAACATCCCTGTGTCTTGAGGCGGCCTGCAAAGACATGCAAGCGTATAAAAAGGCGCTAGCTGGACTGGCCTCACTGCTTCGTCCTAATGGAGCTCTGGTGATGGTGGGAGTTTTAGGGGAGAGTTTTTATGTCGTTAACCAAACCCGCTTCTCCTGTCTGCCGCTAACCGAGCAGAATATTAAAGAATACCTCAAGGATGTTGGCTTTACTGTTCATGAGTTTGAAATCTTTTCTGGACCCAAGCCAGAGAACAACGAGGTGTCCGATTATGAAGCTGTTTTTCAGCTGGTGGCTCTGAAAACTTCCTGATCTGTTGGCCTGCCTTTGTAACGGTCACTGCCACCAACACACTTTTGAGATTATCATCATAATTTTCTTCAATTTAAAGTGAAATAAcctttaacaataaaaatatccaaaataataGACAAAAAGTGGTGCAATTTGCAGCCTtttggatttctttttatttctgcataaatatgacctaaaatgtAAGTGCTAAAACCAGATAAGGAGAACCTAatcaaacaaattacaaaaatattagaCATGTTcaattattaaatgttaaatgataAAAGAGGTTCTTCTAGCCTTTAGGATAACAATAAGCAGCCCTCTGTGGCATGATGTTGCCCTTAGATAACAGACCACTTTTATGATTACATTATTCCTTAATTTTGTTACATGTAAAGAATTGcgattaaaatctttaaaagcctat

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG:

id description
K00541 NNMT; nicotinamide N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259037.3 True 1257 mRNA 0.42 3 17113310 17117221

Neighbor

gene id symbol gene type direction distance location
LOC103032412 gk,LOC107742635,LOC107700103,LOC107667651 coding upstream 3750 17081201 ~ 17109560 (+)
timmdc1 timmdc1 coding upstream 36397 17065402 ~ 17076913 (+)
poglut1 poglut1 coding upstream 53150 17049429 ~ 17060160 (+)
vangl1 vangl1,LOC107552384,LOC107748077,LOC107588836 coding upstream 93108 16909648 ~ 17020202 (+)
LOC103035380 NA coding upstream 296815 16803908 ~ 16816495 (+)
chst10 chst10 coding downstream 25312 17142533 ~ 17149608 (+)
lonrf2 lonrf2 coding downstream 65792 17183013 ~ 17199615 (+)
map4k4 map4k4,LOC108258915,LOC106574534,LOC106575325,LOC107668172,LOC107588849,LOC107707082 coding downstream 96613 17213834 ~ 17317203 (+)
LOC103030825 NA coding downstream 205024 17322245 ~ 17325366 (+)
LOC103032976 si:dkey-1h24.2,LOC108434752,LOC108258345,LOC107707829,LOC560392 coding downstream 307722 17424943 ~ 17473397 (+)
G104162 NA non-coding upstream 65570 17046772 ~ 17047740 (+)
G104151 NA non-coding upstream 178827 16927224 ~ 16934483 (+)
G104144 NA non-coding upstream 252108 16860988 ~ 16861202 (+)
G104082 LOC107662997,LOC107757412,LOC108434698,LOC107707084 non-coding upstream 425937 16682740 ~ 16687373 (+)
G104001 NA non-coding upstream 567300 16544256 ~ 16546010 (+)
G104177 NA non-coding downstream 65075 17182296 ~ 17182538 (+)
G104183 LOC103030517,LOC108434725,LOC100705727,LOC101474240,LOC102192248,LOC103374257,LOC106510766 non-coding downstream 237208 17354429 ~ 17356491 (+)
G104190 NA non-coding downstream 364903 17482124 ~ 17485186 (+)
G104196 NA non-coding downstream 479927 17597148 ~ 17597444 (+)
G104204 NA non-coding downstream 584466 17701687 ~ 17701919 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 218718 16888386 ~ 16894592 (+)
LOC103037450 NA other upstream 538877 16555694 ~ 16574433 (+)
col17a1 col17a1,LOC108434660,LOC107684270,LOC107583183 other upstream 605523 16463938 ~ 16507787 (+)
G104000 NA other upstream 655101 16451175 ~ 16458209 (+)
LOC103032764 LOC108443686,LOC108258285,LOC107746061,LOC107684317,LOC107566138,LOC105891017,LOC107690754,LOC107086972 other upstream 1815371 14999455 ~ 15297939 (+)
LOC103031769 prps2 other downstream 2626 17119847 ~ 17138973 (+)
LOC111193547 NA other downstream 289374 17406595 ~ 17419138 (+)
G104656 pcdh8 other downstream 1801839 18919060 ~ 18923203 (+)
nfkbiz nfkbiz other downstream 2617005 19734226 ~ 19744924 (+)
G105276 NA other downstream 3872052 20989273 ~ 21055483 (+)

Expression


Co-expression Network