Gene
RNA
| Item | Value |
|---|---|
| gene id | G53552 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 5523644 ~ 5539688 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60990 | True | 576 | lncRNA | 0.42 | 2 | 5523644 | 5539688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_05513478_05515588 | NA | coding | downstream | 8056 | 5513269 ~ 5515588 (-) |
| CI01000009_05402729_05410456 | NA | coding | downstream | 113188 | 5402504 ~ 5410456 (-) |
| CI01000009_05367161_05370504 | PTPLB, HACD2, DKFZP459B2333 | coding | downstream | 153140 | 5365766 ~ 5370504 (-) |
| CI01000009_05362086_05363378 | NA | coding | downstream | 159563 | 5362042 ~ 5364081 (-) |
| CI01000009_05278137_05361256 | ADCY5 | coding | downstream | 162166 | 5277137 ~ 5361478 (-) |
| CI01000009_05571226_05587885 | NA | coding | upstream | 30813 | 5570501 ~ 5588015 (-) |
| CI01000009_05675971_05682578 | NA | coding | upstream | 136084 | 5675772 ~ 5683383 (-) |
| CI01000009_05724421_05725824 | NA | coding | upstream | 184153 | 5723841 ~ 5725834 (-) |
| CI01000009_05759177_05759509 | NA | coding | upstream | 219311 | 5758999 ~ 5759770 (-) |
| CI01000009_05784097_05785842 | FZD5 | coding | upstream | 244377 | 5784065 ~ 5785842 (-) |
| G53514 | NA | non-coding | downstream | 14855 | 5506972 ~ 5508789 (-) |
| G53515 | NA | non-coding | downstream | 20254 | 5502395 ~ 5505248 (-) |
| G53511 | NA | non-coding | downstream | 24649 | 5491811 ~ 5498995 (-) |
| G53545 | NA | non-coding | downstream | 46904 | 5474236 ~ 5476740 (-) |
| G53510 | NA | non-coding | downstream | 115300 | 5407998 ~ 5408344 (-) |
| G53566 | NA | non-coding | upstream | 13202 | 5552890 ~ 5553101 (-) |
| G53916 | NA | non-coding | upstream | 45351 | 5585039 ~ 5596678 (-) |
| G53988 | NA | non-coding | upstream | 190946 | 5730634 ~ 5730864 (-) |
| G53997 | NA | non-coding | upstream | 206887 | 5746575 ~ 5746788 (-) |
| G54000 | NA | non-coding | upstream | 212252 | 5751940 ~ 5752165 (-) |
| G52828 | NA | other | downstream | 1292175 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 2261687 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 2624237 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 2961111 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 2886133 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 3318464 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 6748529 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 8435700 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 8493876 | 14033564 ~ 14037873 (-) |
