tmem255b (tmem255b)


Basic Information

Item Value
gene id tmem255b
gene name tmem255b
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 20566129 ~ 20593330 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674352.1
TGTAGCTCATGTTTCTGagagtctctctctcctgaAGAGCAGTCTGGCTGTTCCTCAGCGCTTCAGTGTTGTTATTGATCAGGGCTGgaggtggttggtgtggtgtgtgtatgaggCTGTAAACTCGATTTCGAAACGGAGTTTCTCTGCTCGGGGAGAGAACAGTCCCGCGGGGAGCTGAGAGCACCGGGAGGGACCGGGTACCGGAGAGTGAGCGGGTTACTGAGCGGAGTCTGGGAGGAGGAGAGTCGGGGCTCTGAGGGGAGAAGCGGCGGAGGAGCGGAGCGGGAGAGATGCAGCAGCAGCCGGTGGCGGTTCAGCCCGCGGCGGACAGCCCGGACCCCGCAGAGCAGTACACGAAGCGGCGTCGGACAGCGTTATGGTGCACCGTGGCCTTGCTCGTGCTGTCCATCATCGTGCTGGTGATTGGGCTCCTGTCTGCCACTCGCACTGGCAATGTAACAGTGGCTGGGTACTACCCTGGCATCATACTGAGCTTTGGAACGTTCCTGGGTATAGTTGGGCTGAACGTGGTGGAGAATCGCAGACCCATGTTGGTGGCATCCATCATTTTCGTCAGCCTGGGCGTGATATCCTGTTTCTTCTGCGCCATCATAGACGGCATCATTGCTGCTGAGTTTATTGACAGGAGGCCTCTAATGGAGGGGAGGTGCCAGTTCTACGCCAGTGGAACAGGATATGCATATGACAACTACTATACTGAGGTGACGTGTCAGTCCTTTAACGAGCAATGCAACCTCAAGGTGAAGAGCAACACCTGCTACTGCTGTGATTTATACAGCTGTGGGAGCCCAGAGTACCACGCCCATTACTTTGAGTTCACGGGTGTGAGTAGCTGCTTTGATGTGGTGCACCTGCACAGACTGCTGTGGTCTAGTGTAGTGCTCAACGTACTGGGGGTCTTCCTGGGCATCGTCACTGCTGCCATACTAGGAGCTTACAAGGACATGGCTCCAGCTGTTCAGACTCAGATGTCTCCCAGTCCTGCTCCCCCTCCACACATCCTCTATAACCCCACCCAGCATATGGTCACCTATGCAGGTTTCTGCCCCTCAGGACAAGCCCTGCCTGCCTACCCCAACTACCCAATGCCCATGCAGCACCTGAACAGCTACCCAGCCGCAGGTCCTTCTCAGCCCAGTCCTGAGGTGGCCTGA

Function

symbol description
tmem255b Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 255B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674352.1 True 1178 mRNA 0.57 9 20566129 20593330

Neighbor

gene id symbol gene type direction distance location
cenpe LOC107577987 coding upstream 1544 20532402 ~ 20564585 (+)
grk1 grk1,grk1a,LOC107748333 coding upstream 36111 20519360 ~ 20530018 (+)
tfdp1 tfdp1 coding upstream 52989 20494467 ~ 20513140 (+)
tmco3 tmco3 coding upstream 77839 20463644 ~ 20488290 (+)
lamp1 NA coding upstream 177767 20371424 ~ 20388362 (+)
LOC103029654 LOC108437114,LOC108258365 coding downstream 172412 20765742 ~ 20774329 (+)
LOC103029333 LOC108437114,LOC108258365 coding downstream 189740 20783070 ~ 20800531 (+)
gtf3c3 gtf3c3,LOC107750061 coding downstream 210724 20804054 ~ 20827275 (+)
LOC103031253 hecw2,LOC107676038,LOC108258347,LOC107674007,LOC107706834 coding downstream 267615 20860945 ~ 20908775 (+)
mdh1b NA coding downstream 351615 20944945 ~ 20957033 (+)
G105041 NA non-coding upstream 141554 20348319 ~ 20424575 (+)
G105044 NA non-coding upstream 168857 20394308 ~ 20397272 (+)
G105032 NA non-coding upstream 284643 20280714 ~ 20281486 (+)
G105018 NA non-coding upstream 322774 20242905 ~ 20243355 (+)
G105017 NA non-coding upstream 327881 20237850 ~ 20238248 (+)
G105074 gas6,LOC107571980,LOC107573434 non-coding downstream 25460 20618790 ~ 20620441 (+)
G105079 NA non-coding downstream 55766 20649096 ~ 20652261 (+)
G105235 NA non-coding downstream 161963 20755293 ~ 20755532 (+)
G105271 NA non-coding downstream 235038 20828368 ~ 20860880 (+)
G105270 NA non-coding downstream 278461 20871791 ~ 20909285 (+)
nfkbiz nfkbiz other upstream 821205 19734226 ~ 19744924 (+)
G104656 pcdh8 other upstream 1642926 18919060 ~ 18923203 (+)
LOC111193547 NA other upstream 3146991 17406595 ~ 17419138 (+)
LOC103031769 prps2 other upstream 3427156 17119847 ~ 17138973 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 3671537 16888386 ~ 16894592 (+)
G105276 NA other downstream 395943 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other downstream 425708 21019038 ~ 21028990 (+)
G105357 NA other downstream 733862 21327192 ~ 21369204 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other downstream 1661755 22255085 ~ 22283453 (+)
LOC103045705 LOC107725350,LOC107692700,LOC108439093,LOC107565240,LOC108441473 other downstream 1931927 22525257 ~ 22588961 (+)

Expression


Co-expression Network