LOC103022503


Basic Information

Item Value
gene id LOC103022503
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 25372806 ~ 25374832 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674360.1
ATGACCAACTATGATCCAACAACCAAGGTCACCCAAAATATCTCTAGACCTGCAAAAGATGTTTGGCTGCATCTCCAAGTGAAGGCGAGGACGAACCTAGCCCGCTGGTCAGACTGTGGGACGAGTTTTACTCAAGTGAATcatgtccaaaacacaccagcaaatTCACACAAGGAGAAGAAACCGTTTCAGTGTTCAGattgtgggaggagttttactagacagagcaatctcaaaaatcactggcgtgttcacacaggagagaaaccgtatcagtgctcagactgtgagAGGAGTTTTACTCACCAGAGTgacctcaaaaaacaccagcgcattcacacaggagagaaaccgtatcagtgctcagactgtgagAGGAGTTTTACTCACCAGAGTgacctcaaaaaacaccagcgcattcacacaggagtgaaaccgtattactgctcagcctgtgggaagagttttaaccAACTGGCGAATCTTAACCTACACCAGCAAATTCACACAGGAGTGAAACCctatcagtgctcagactgtggaaagagttttactacacaaagCAATCTCAAAAgtcaccagcgcgttcacacaggagagaaaccgtattactgctcagcctgtgggaagagtttttatAGACGGAGTTATCTTCagctacaccagcgcattcacacaggagtgaaaccgtattactgctcagcctgtgggaagagtttttatAGACGGAGTTATCTTCagctacaccagcgcattcacacaggagagaaaccgtatcactgctcagtctGTGCGAAGAGTTTTAAACGACTAACTTATCTTCagctacaccagcgcattcacgcTGGTgtaaaaccgtatcactgcttagtctgtgggaagagtttttatAGACGGAGTTATCTTCAGCTACAcgagcgcattcacacaggagtgaaaccgtattactgctcagcctgtgggaagagctttactcaacaaagtagtctcaaaatacaccagcgcattcacacaggagagaaaccgtatcactgctcagagtgtggaaaaCGCTTCAATCGACTGAGCTATCTCCAgcttcaccagcgcattcacaccggagagaaaccgtttcaatGCGTAgaatgtggaaagagttttaatcgTCTGAGCTACCTCCAACAGCACCAGCgtgttcacacaggagagaatcCATATAACTGCTTAGTCTGCGGAAAAAGTTTCACTCAACAGAGTAGCTTCagaacacaccagcgcattcacacaggagtgaaaccgtattactgctcagcctgtgggaagagttttaatcgcgTTAGTTACCTCCagcaacaccagcgcattcacacaggagtgaaaccgtattactgctcagcctgtgggaagagttttaatcaaccgAGTAGTCTCAAAatccaccagcgcattcacacaggagagaaaccgtatcactgctcagactgtgagaaGAGCTTTAGGCATTCAGGTGCATTTAAGAAACATAAGTGCAGTAAGAGCAGTCACTAAAGTGGACAGTGACACTTCTTCAATCATCCCAGTACTCAACTTACATTTCAAACTATCGAGCAACTGggttttttaaagaagtaaaaaaaataaatccgtTGTGTTAATGAGCATCTGAAGCATATTCAAGGAAAAAACAGACTTTTGTGTGCTTAACGCCAGGAGGACGCCCTTTCAGCTCAGATTCTGAAGTGGCATGCATTTGAAGACAACACCCTCAAAAATTCAtattattgatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674360.1 True 1766 mRNA 0.45 2 25372806 25374832

Neighbor

gene id symbol gene type direction distance location
slitrk6 slitrk6,LOC107674010,LOC107730399,LOC107558904,LOC107737039,LOC107574216,LOC107698122 coding upstream 270233 25076936 ~ 25102573 (+)
gpc6 LOC108414264,LOC105911916,LOC107730398,LOC101477426,LOC100710496,LOC107744956 coding upstream 1257345 23970691 ~ 24115461 (+)
LOC103035907 NA coding upstream 1733918 23632379 ~ 23638888 (+)
chtf18 chtf18,LOC107725360 coding upstream 1820108 23524716 ~ 23552698 (+)
plk1 plk1,LOC107722962 coding upstream 1882601 23480456 ~ 23490205 (+)
LOC103023109 NA coding downstream 8040 25382872 ~ 25386300 (+)
LOC111193564 NA coding downstream 44708 25419540 ~ 25422258 (+)
LOC103025458 NA coding downstream 48880 25423712 ~ 25449279 (+)
LOC111193460 NA coding downstream 110011 25484843 ~ 25519366 (+)
ube2f ube2f,LOC107725407,LOC107674019,LOC107556276,LOC107707607,LOC107566887 coding downstream 365395 25740227 ~ 25759643 (+)
G106250 NA non-coding upstream 159337 25213203 ~ 25213469 (+)
G106248 NA non-coding upstream 160730 25211579 ~ 25212076 (+)
G106220 NA non-coding upstream 463777 24908744 ~ 24909029 (+)
G106217 NA non-coding upstream 464875 24907148 ~ 24907931 (+)
G106205 NA non-coding upstream 574605 24797868 ~ 24798201 (+)
LOC103043670 NA non-coding downstream 26085 25400917 ~ 25401805 (+)
G106274 NA non-coding downstream 77305 25452137 ~ 25542268 (+)
G106273 NA non-coding downstream 81288 25456120 ~ 25548983 (+)
G106277 NA non-coding downstream 129974 25504806 ~ 25530624 (+)
G106281 NA non-coding downstream 148745 25523577 ~ 25526560 (+)
LOC111193563 NA other upstream 3367 25361744 ~ 25369439 (+)
G106146 NA other upstream 959708 24411208 ~ 24413098 (+)
G106036 NA other upstream 1383214 23987207 ~ 23989592 (+)
G106017 si:ch73-12o23.1,LOC108439175,LOC108258846,LOC107722961,LOC107590719 other upstream 1449035 23915635 ~ 23923771 (+)
LOC103038624 zgc:77849,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708,LOC107564565 other upstream 2552710 22810079 ~ 22820096 (+)
LOC111193565 NA other downstream 83983 25458815 ~ 25570821 (+)
LOC103037236 NA other downstream 779585 26154417 ~ 26171801 (+)
G106661 lancl1 other downstream 2639684 28014516 ~ 28022047 (+)
G106673 NA other downstream 2691520 28066352 ~ 28066983 (+)
LOC103027743 NA other downstream 3328235 28703067 ~ 28724026 (+)

Expression


Co-expression Network