LOC103039357


Basic Information

Item Value
gene id LOC103039357
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 26188965 ~ 26193144 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674363.1
ATGGTCTATATATGGCACTCTGTTGGCCACTGCCACTGCCCTGCCACTGACTGTTCCTGTGACAGTGGCATCTGCCACCTCCATTCCAATGCCAGCAGTGCACGCTGTTCCTGGGGAGCTGTGGCATATGTGTGCTCCACTGGCACTGGAGATGTAGAGGAAGCAGGTGCCATCTGCACAGGTACAGGGGTGACGGCAGGTCTTACTGCCACAGGAACAGCAGGCACTGCTGGCACTGGAGCTGTAGTGGAGGCGGGTGCCACTGGCACTAAAGCTGAATTGGCAGCAGGCACTGCTAGCACaagaacaggggtggcgccatgtgcAGCTGGCACTAAAGCTGCAAGGACAGGCACCGTTGGAGCTGGTACTGGAGCTGATGCGGTTGGTGACGCTGAATCTGGTACTGGAGCAGAGGTGGTGGGTGCCGCAGGCACTGAAGCTGACGCGATGGGTGCCGCTGAAGCTAGTAATGAAGtgggggcagcaggtgctgctgAAGCTGGGACTCAAGCTGAGACAGCTGTGTGTGGTGTATCTCCATACGGTCCTCATCGGTATCACTTTGTGAAACAGAAGAAATCCTGGACTGAAGCTCAGAGCTACTGCAGACAGACCTACACTGATCTGGCCACCATCAACAACATGGACGAGATGAAAAAGCTGAACGAGGCTCTGAAGGGTAAAGGTGGAGACTTCGTTTGGATTGGTCTGAACAGAGGGAACACTGGAAGATGGCAGTGGTCTCTGGCAGATGGAAGTTTCTACAGTGTAGGAAATTCGTACCAGAAGTGGTACAGTGGAGAACCAAATAATGCTGGGGGGAATGAGTTCTGCATTGCGATGAAGCAAGAAGATGGAACCTGGTTTGATGATGAGTGTGGGATAATTTgtacttttgtgtgttttgacgaaaataaaccaaacactGAGAGatacatatttattaatgaCAAAAAGACCTGGAGTGAAGCTCAGAGCTACTGCAGAGAACATCACACAGACCTGGCCAGTGTGAGGAACCCGACTGAGAGCCAGCTGATCATAAATGCGAccataaataataatcatttctGGATCGGCCTGTTTAACGACTCCTGGAAGTGGTCAGATCAGAGCAGCTCCTCATTCCGATACTGGAATTCTACCCAGCcagataataataatcttaCAAAATGTGCTGCCGTGTCTGTGAAGGACCAGGGTCAGTGGGAAGATATAAGATGTGAGGAACAGCACCCATTCATCTGCCATGAGAATGAACTGATCTTGATCCAGGAGAATCTGAGCTGGAAAGGAGCTCTGAGATACTGCAGAGAGAATCATGTGGACCTGGTCTCAGTTCACTCTGAGGAGATCCAGCTCTGGGTGAAGGATGTGGCTCAGAATGCCTCCACTGATCATGTGTGGCTGGGTCTGCGTCACACCTGCACTCAGGGATTCTGGTTCTGGACGAGTGGGTTTTCCGTCTGCTATGATAACTGGGCTCCAGGTAACGGTGCAGAAGGTGAAGACTGCAGTCCTGTAGAGAGAACCGGAGCGGTGCAGGCTAGAGGAGATCAGAAGTGGGTCAGCCTGCCTGAGAACCAGACTCTCAACTTCATCTGCATCAGATATGAAGGTTAGATTTAGTGTTTATGTGTGATTTGTACAAAATGTGCAAATAGACACGACATAAAatcttaattattcattatttttcccAGGTAGAAATCAGGTGTGTAGAATTTTGTTGCCCAGAATCAGCAGCTTAACAGCTTTACCACATTCTCTGTATATTAGCTTAAAGTAGTgctttatactgtatgtactgtaactgTTAAGATTAAATGCATTTCCTTGTTTCATATTTGTGCCTCTTTACCTTTTTCTAATGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674363.1 True 1878 mRNA 0.48 5 26188965 26193144

Neighbor

gene id symbol gene type direction distance location
LOC111193484 NA coding upstream 110166 26075698 ~ 26078799 (+)
LOC103038099 erbb4,LOC108441681,LOC108440448,LOC101079286 coding upstream 165292 25763847 ~ 26023673 (+)
ube2f ube2f,LOC107725407,LOC107674019,LOC107556276,LOC107707607,LOC107566887 coding upstream 429322 25740227 ~ 25759643 (+)
LOC111193460 NA coding upstream 669599 25484843 ~ 25519366 (+)
LOC103025458 NA coding upstream 739686 25423712 ~ 25449279 (+)
LOC103039973 NA coding downstream 52095 26245239 ~ 26248347 (+)
LOC111193566 NA coding downstream 57029 26250173 ~ 26254877 (+)
slitrk1 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding downstream 317977 26511121 ~ 26515238 (+)
LOC111193487 NA coding downstream 445823 26638967 ~ 26643210 (+)
atic atic,pur9,LOC107556291,LOC107674004,LOC107750210 coding downstream 1394905 27588049 ~ 27604231 (+)
G106380 NA non-coding upstream 158283 26026244 ~ 26030682 (+)
G106391 NA non-coding upstream 228516 25954937 ~ 25960449 (+)
G106370 NA non-coding upstream 478509 25710216 ~ 25710456 (+)
G106289 NA non-coding upstream 622539 25563594 ~ 25566426 (+)
G106275 NA non-coding upstream 628937 25558581 ~ 25560028 (+)
G106446 NA non-coding downstream 29992 26223136 ~ 26228689 (+)
G106466 NA non-coding downstream 91748 26284892 ~ 26285416 (+)
G106476 NA non-coding downstream 116585 26309729 ~ 26309982 (+)
G106486 NA non-coding downstream 259064 26452208 ~ 26452448 (+)
G106541 NA non-coding downstream 576470 26769614 ~ 26769877 (+)
LOC103037236 NA other upstream 17164 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 618144 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 819526 25361744 ~ 25369439 (+)
G106146 NA other upstream 1775867 24411208 ~ 24413098 (+)
G106036 NA other upstream 2199373 23987207 ~ 23989592 (+)
G106661 lancl1 other downstream 1821372 28014516 ~ 28022047 (+)
G106673 NA other downstream 1873208 28066352 ~ 28066983 (+)
LOC103027743 NA other downstream 2509923 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 2955921 29149065 ~ 29159680 (+)
G107117 NA other downstream 3587182 29780326 ~ 29780927 (+)

Expression


Co-expression Network