LOC103033028


Basic Information

Item Value
gene id LOC103033028
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 162996 ~ 169704 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674405.1
cacCCACCTCAAACCCTTCTTACCGTCAGTCTCTGGAGTCTTCCTCTACTGCCTGAGCAGCAAGAACCTCACCTGCTCCTCCTACCAGACTATtCTACCTGTGTTCTCTCAGAAGTTCTCTTCGATGGATGCTGTACAGGCAGAATTTGGTGCTGCAGTACTTTATCAAACCCTTCCTGACTAGTAACTCCACAGGGGGCTGTGTAAGTATCAACAACGCCGAGTGGTTATCGCGTAACTTCGGGCAGTTCTCTCAGATCATCACCGTGAATCAGCTGATGAACATCAACAAAAACTTTAACCCTCTGGATGTCCTGGACATGCTAAATCTCGGTCAACTGGTTGAGGTTTTGACCTCATCTGGCCTCATCAGCACCTCCGCACAGGTGAACCTGCTGATGAACAATGTTCCAGATTCTCAGCTCTACATGTTCTTTACTTCTCTGGCCAATACACAGCAGggTGTGGTACTCTCTGGCCCAGTAAAGGTGACTCTcctgcagcaggtgctggataGGGTGAACATGGCAGACCTGTCGGTATCTCAGATGCAGGTTTGGGTTGATACCATTCTGCCCCCATTGATCCCAGCTATAACCCAAAACCAGATCCCAGAGTTCTTCACCATGTTCCAGAACACACCCTGCAACATCAGCCAGCAGGCGGTCTTACTGTTGAACAGCTCCTCCTCCAGTTTCAGTAATGACATGCTGCATAACGTCTACCTGGAGATCATCAACTCACTGAAAGGTAAGGATGGGTTGCGTTGCTATGGGAACCAGAGCTTCTACTCCTTCCTGCAGTCATCTTTCATGAGTTTCCAGTTCCCGCCCCTCTCCGTCCTCCTGTCAATCATCCCCACCGATCTCCAGCCACAGCTGCTGAGCTCCATGTCTCCAGCTGAGCTGTACAGTTATCTGAGTGGACCCGGCGCCGTGGACGACCCGACCCAACTCTGCCAAGTCTTTGACAACTACCAGAGCATCGGAGAGTACCTGCAGAATGAGCCGGTTGTATCTGCAGCTGTGGGCAGGCAGACGTTGGCATGTGTTTGGCCTCGTGCTCTCAGTGCTTCGTCTCAGGATGAGGTGGATCAGTGGTTTAATGTCAGACTGGGTCGGTACCTGCCCTTCCTCAGCTCTCAGCTCATCAACTCCACTCAACTCAGCGGCGCCTCCTGCCTGTCCTACAGGAAACTTGTGTCGGTTATGGGAGGGTACAACTACAGCAACGTGGACTTCACACAGCAGGACGTCTACATTGCCATCAAGGACTACCTGACCACAGACTTCACCCCCAAGTGCTACAACCCTGCAGACCCGTTGCTAAACTCCACCTCCTGGTTTGTGGACTACCTCGGCTTCTTCATCTCCTTCGTCAGCTTGGAGGACCTGGATGCATTCGGAGGATTAGAGCTGCAGAGCTTCACACTAGACATGACGAACCTGAAACTGTTCCAACAACACAGCGTTAATGAAGATGTCATGTCTGCGTATGTGGAGATGCTGTATGAAGTGAACAAAACCTTCAGTGCCTCACTTCTGCCTGGAGTCTTACAATGCTTTGCTCCGGCCATCGGATTTACTGACCTCGACAGCTCAGCGTCAGTGACCGTATTGGATTCCCCTGAAGACCTACTGCAGCAGCTTAGACCCTACTgtTTCGGCGGCTCTGGCGGAGAACATGGGTTCTGTTACGTCCTCGTCGATCTCGGCTCTGGGGAACTCTAGTACCGGACTCAGTACCGGCCAGATCTCCAGTGCCAGCCCAGCCATCCTTAGCTCCTCCCTCAGCGTTCTCAGCAACGTCATTGGCTGGAGCCAAGCCCAGACCCTGACCATCGTCCACACCCTGCTCAACTCCGGAGTTTTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674405.1 True 1875 mRNA 0.52 14 162996 169704

Neighbor

gene id symbol gene type direction distance location
LOC103027555 NA coding upstream 37847 98126 ~ 125149 (+)
LOC111193489 NA coding upstream 145152 6084 ~ 17844 (+)
LOC107197101 NA coding downstream 7976 177680 ~ 182649 (+)
LOC111193578 NA coding downstream 17443 187147 ~ 188599 (+)
LOC103028503 NA coding downstream 46309 216013 ~ 223221 (+)
rexo5 NA coding downstream 106949 276653 ~ 293379 (+)
gtf3c1 NA coding downstream 141962 311666 ~ 341737 (+)
G99345 NA non-coding upstream 68814 92045 ~ 94182 (+)
G99344 NA non-coding upstream 74429 86699 ~ 88567 (+)
G99340 NA non-coding upstream 85974 66706 ~ 77022 (+)
G99356 NA non-coding downstream 27962 197666 ~ 200573 (+)
G99367 NA non-coding downstream 63223 232927 ~ 234373 (+)
G99368 NA non-coding downstream 65153 234857 ~ 235793 (+)
G99373 NA non-coding downstream 78236 247940 ~ 249482 (+)
G99352 thumpd1 non-coding downstream 94672 264376 ~ 265137 (+)
LOC103031902 NA other upstream 125932 20991 ~ 37064 (+)
G99561 NA other downstream 304956 474660 ~ 482219 (+)
LOC103036139 NA other downstream 317770 487474 ~ 496376 (+)
LOC111193579 NA other downstream 364325 534029 ~ 540471 (+)
LOC111193492 NA other downstream 420479 590183 ~ 593200 (+)
ubl5 ubl5 other downstream 938772 1108476 ~ 1110592 (+)

Expression


Co-expression Network