Gene
RNA
| Item | Value |
|---|---|
| gene id | G54000 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 5751940 ~ 5752165 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU61479 | True | 226 | lncRNA | 0.35 | 1 | 5751940 | 5752165 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_05724421_05725824 | NA | coding | downstream | 26106 | 5723841 ~ 5725834 (-) |
| CI01000009_05675971_05682578 | NA | coding | downstream | 68557 | 5675772 ~ 5683383 (-) |
| CI01000009_05571226_05587885 | NA | coding | downstream | 163925 | 5570501 ~ 5588015 (-) |
| CI01000009_05513478_05515588 | NA | coding | downstream | 236352 | 5513269 ~ 5515588 (-) |
| CI01000009_05402729_05410456 | NA | coding | downstream | 341484 | 5402504 ~ 5410456 (-) |
| CI01000009_05759177_05759509 | NA | coding | upstream | 6834 | 5758999 ~ 5759770 (-) |
| CI01000009_05784097_05785842 | FZD5 | coding | upstream | 31900 | 5784065 ~ 5785842 (-) |
| CI01000009_05798886_05836104 | PLEKHM3 | coding | upstream | 45717 | 5797882 ~ 5838430 (-) |
| CI01000009_05844758_05855489 | IDH1 | coding | upstream | 91963 | 5844128 ~ 5855944 (-) |
| CI01000009_05949578_05961385 | ARMC8 | coding | upstream | 197413 | 5949578 ~ 5961385 (-) |
| G53997 | NA | non-coding | downstream | 5152 | 5746575 ~ 5746788 (-) |
| G53988 | NA | non-coding | downstream | 21076 | 5730634 ~ 5730864 (-) |
| G53916 | NA | non-coding | downstream | 155262 | 5585039 ~ 5596678 (-) |
| G53566 | NA | non-coding | downstream | 198839 | 5552890 ~ 5553101 (-) |
| G53556 | NA | non-coding | downstream | 205303 | 5539205 ~ 5546637 (-) |
| G54032 | NA | non-coding | upstream | 241020 | 5993185 ~ 5993404 (-) |
| G54065 | NA | non-coding | upstream | 266881 | 6019046 ~ 6019356 (-) |
| G54068 | NA | non-coding | upstream | 270448 | 6022613 ~ 6022827 (-) |
| G54077 | NA | non-coding | upstream | 289293 | 6041458 ~ 6041667 (-) |
| CI01000009_06046712_06060022 | NA | non-coding | upstream | 302019 | 6045874 ~ 6060442 (-) |
| G53515 | NA | other | downstream | 246692 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 1520471 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 2489983 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 2852533 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 3189407 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 2673656 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 3105987 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 6536052 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 8223223 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 8281399 | 14033564 ~ 14037873 (-) |
