Gene
RNA
| Item | Value |
|---|---|
| gene id | G54032 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 5993185 ~ 5993404 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: cadherin-12-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU61530 | True | 220 | lncRNA | 0.55 | 1 | 5993185 | 5993404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_05977117_05981366 | CDC25C.L, RAB5D, RAB5D.S, RAB5B | coding | downstream | 10487 | 5976113 ~ 5982698 (-) |
| CI01000009_05949578_05961385 | ARMC8 | coding | downstream | 31800 | 5949578 ~ 5961385 (-) |
| CI01000009_05844758_05855489 | IDH1 | coding | downstream | 137241 | 5844128 ~ 5855944 (-) |
| CI01000009_05798886_05836104 | PLEKHM3 | coding | downstream | 154755 | 5797882 ~ 5838430 (-) |
| CI01000009_05784097_05785842 | FZD5 | coding | downstream | 207343 | 5784065 ~ 5785842 (-) |
| CI01000009_05994558_06000514 | NA | coding | upstream | 1154 | 5994558 ~ 6000514 (-) |
| CI01000009_06046712_06060022 | NA | coding | upstream | 52470 | 6045874 ~ 6060442 (-) |
| CI01000009_06072320_06072613 | NA | coding | upstream | 78769 | 6072173 ~ 6074382 (-) |
| CI01000009_06124385_06127298 | NA | coding | upstream | 130382 | 6123786 ~ 6128578 (-) |
| CI01000009_06214501_06218695 | TLR20.2, TLR20F | coding | upstream | 220891 | 6214295 ~ 6218832 (-) |
| G54000 | NA | non-coding | downstream | 241020 | 5751940 ~ 5752165 (-) |
| G53997 | NA | non-coding | downstream | 246397 | 5746575 ~ 5746788 (-) |
| G53988 | NA | non-coding | downstream | 262321 | 5730634 ~ 5730864 (-) |
| G53916 | NA | non-coding | downstream | 396507 | 5585039 ~ 5596678 (-) |
| G53566 | NA | non-coding | downstream | 440084 | 5552890 ~ 5553101 (-) |
| G54065 | NA | non-coding | upstream | 25642 | 6019046 ~ 6019356 (-) |
| G54068 | NA | non-coding | upstream | 29209 | 6022613 ~ 6022827 (-) |
| G54077 | NA | non-coding | upstream | 48054 | 6041458 ~ 6041667 (-) |
| G54137 | NA | non-coding | upstream | 211007 | 6204411 ~ 6204799 (-) |
| G53515 | NA | other | downstream | 487937 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 1761716 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 2731228 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 3093778 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 3430652 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 2432417 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 2864748 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 6294813 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 7981984 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 8040160 | 14033564 ~ 14037873 (-) |
