LOC103047056 (npy2rl,LOC108439369,LOC107758849,LOC107590775,LOC107714138,LOC107665946,LOC107692719)


Basic Information

Item Value
gene id LOC103047056
gene name npy2rl,LOC108439369,LOC107758849,LOC107590775,LOC107714138,LOC107665946,LOC107692719
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 13773430 ~ 13805229 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674741.1
TTATGTACGTATACTTATACACAACCTAATATCTCTATACGCAcaaatattctctctctctctctctctctctctctgttcccgTTCTtaacccctcctcctcctctgctcTGTGAGAGTGTAAGTTGTGAGAGATgggctgctctctctctctctctctctccggcaGGGCGGCTGAAGCTGCAGCTGGTAAGTCTGTACAGTGTGTTTTCGGTGAGGAAGAGAGGGAATTAAAGAGTTATATAATGAGGACGGGATCTGTGGAAGAGACGGAAGATCCGCCAAACCGTCACATCCCTCCAGAGATCACAGAGAGACACTACTGTCCTTCTACACAGATCAACATGAGGATATAACCGATGGATGGCATCAATGCAGCGAATAGCTCTTTGAGAGCTGAGATCCTGAGTAACAGCGTGGACTCTCCTGACACCGCTCTGACCCACTCTTTACTCGAGCTCGGGGACAGCACCAGACTGCTGGGGGTTCAGGTCATCCTGATCCTGGCCTACAGCACCATCATCCTGCTGGGTGTGGTGGGGAATTCAGTGGTGATTTATGTGGTCTGCAGGTTTAAGACTCTCCGCACCGTCACCAACTTCTTCATCGCTAACCTGGCGGTGGCAGACCTGCTGGTGAACACGCTGTGCCTCCCCTTCACGCTGGCGTACACCCTGCTGGGGGAGTGGAAGTTCGGACAGGTGCTCTGCTTCACGCTGCCGTACGCGCAGGGCCTGGCTGTGCACGTGTCCACCGTCACGCTTAACGTCATCGCTCTGGACCGTCACAGATGCATCGTTTATCACCTGGAGACTCGGATGTCGAAGGACACTTGTTTTCTCATCATCGCGATCACCTGGGTGATTAGTGCCGTGCTGGCCAGCCCTCTCGCCATCTTCAGGGAGTACGGGATGGTGGAGCTCTCTCCAGGTGAATCTATTGAAGTGTGTGGAGAGAAGTGGCCGGGGAGCAGCACAGACGGTACTCTGTACTCGATCTCTATGCTGCTGCTTCAGTATGTGTTGCCGTTAGCCGTGATCTCTTTTGCCTACATCCGGATATGGAGTAAACTCCGTAACCACGTCGGCCCGGCAGAGCGCAATGACCGCCACCGTCGCCGGCGCAAGACCACTAAAATGCTGGTCACTATGGTAGTGGTGTTTGCTGTGAGTTGGCTGCCCTTCCACGCCTTCCAGCTGGCTATAGACATCGACAGCAGTGTCCTGGTGATGCGGGACTTCAGGCTTCTGTACACCGTTTTCCATATTGTGGCCATGTGCTCAACATTCGCCAACCCCATTCTGTACGGGTGGATGAATCGTAACTACCGCAGTGCCTTCATAGCCGTCTTTCGCTGCGAGCAGCGGCTTGATTCGGTGCATCCCAAGGGCCGAGACGCCGCAGCCGTCCGGAACAAGACCGTGAAGGCTCTAGAGGCTCAGGACGCTCTGGCTACTCACCTCAGTGCTACAGACGTCTGAGACCGTACTGCAGACTGAGGACTTCAGACCAGGAGCAATCAACTGGTCTTCATCTAACTGAAGTGGGGAGCTGTCTTACTCGTACTGAATATATTATACTGATATTAAAAAGGACTTTTAGTACGAAGACACCGAGGGAATTTTAAAAGAGAAAGACTGTGTGTGCTCTTCCTCTGAAAACCACTCAGCTGGTTAAAAATGGTCGTCCACTTTCACTGAAAAGGACATCTAATGATATCACACCCACTTCTGCTTATCCCAGACCTCCAGTCCCTCAGATTTATACAGTGATTGTACAGTCTTTCCTGCAGCATCATCTGGGGCACTACTGACGCAAACAGCGGTGCACTTTGGGACGGTGTTTACAGCAAATTAGCCCTCCTTCCATTCCCACATTACTGATGCACACTTACTACAGTACATATTAACAAGGGAGCACTCTGTGAGAGGACTCCAccactgaagagagagagagaga

Function

symbol description
npy2rl Enables neuropeptide binding activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in eye and intestine. Human ortholog(s) of this gene implicated in Huntington's disease; morbid obesity; and obesity. Orthologous to human NPY2R (neuropeptide Y receptor Y2).

NR:

description
PREDICTED: neuropeptide Y receptor type 2-like

GO: NA

KEGG:

id description
K04205 NPY2R; neuropeptide Y receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674741.1 True 1959 mRNA 0.52 4 13773430 13805229

Neighbor

gene id symbol gene type direction distance location
LOC103023349 LOC108439383,LOC108258976 coding upstream 93209 13676444 ~ 13680221 (+)
LOC103023667 LOC108439371 coding upstream 97073 13673298 ~ 13676357 (+)
LOC103024001 LOC108439370,LOC108258974,LOC107758869,LOC107590749 coding upstream 107684 13630617 ~ 13665746 (+)
LOC103043054 NA coding upstream 182446 13580127 ~ 13590984 (+)
cfap58 NA coding upstream 343493 13225301 ~ 13429937 (+)
eif3f eif3f,LOC107723164,LOC107758850,LOC107665937 coding downstream 116019 13921248 ~ 13927798 (+)
LOC111193619 NA coding downstream 246575 14051804 ~ 14061543 (+)
LOC103033906 LOC108258922,LOC108439361,LOC107564279,LOC107692629,LOC107665976 coding downstream 418751 14223980 ~ 14244056 (+)
LOC103031172 LOC103031172,LOC108439360 coding downstream 477698 14282927 ~ 14290159 (+)
LOC103031792 LOC108439359,LOC107723198,LOC107564241,LOC107692626,LOC100334711 coding downstream 503697 14308926 ~ 14330415 (+)
G103323 NA non-coding upstream 7964 13757846 ~ 13765466 (+)
LOC111193536 NA non-coding upstream 147984 13606108 ~ 13625446 (+)
LOC111193537 NA non-coding upstream 168052 13603596 ~ 13605378 (+)
G103255 NA non-coding upstream 176858 13596251 ~ 13596572 (+)
G103221 NA non-coding upstream 240122 13532732 ~ 13533308 (+)
G103347 NA non-coding downstream 62184 13867413 ~ 13868223 (+)
G103349 NA non-coding downstream 83678 13888907 ~ 13910343 (+)
G103389 NA non-coding downstream 219063 14024292 ~ 14079252 (+)
LOC111193479 NA non-coding downstream 256440 14061669 ~ 14062007 (+)
G103410 NA non-coding downstream 314509 14119738 ~ 14129753 (+)
sh3pxd2a sh3pxd2a other upstream 740924 12851001 ~ 13032506 (+)
cryzl1 cryzl1 other upstream 1251127 12483622 ~ 12522303 (+)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 1748666 12000639 ~ 12024764 (+)
map2k7 map2k7,LOC107676852,LOC107712243 other upstream 2478615 11274746 ~ 11294815 (+)
LOC111193528 NA other upstream 2903274 10868577 ~ 10870156 (+)
G103376 zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776 other downstream 123836 13929065 ~ 13935667 (+)
G103490 LOC106510829 other downstream 455396 14260625 ~ 14261539 (+)
G103551 NA other downstream 813406 14618635 ~ 14619082 (+)
G103561 NA other downstream 885814 14691043 ~ 14692199 (+)
LOC103032764 LOC108443686,LOC108258285,LOC107746061,LOC107684317,LOC107566138,LOC105891017,LOC107690754,LOC107086972 other downstream 1194226 14999455 ~ 15297939 (+)

Expression


Co-expression Network