LOC103033906 (LOC108258922,LOC108439361,LOC107564279,LOC107692629,LOC107665976)


Basic Information

Item Value
gene id LOC103033906
gene name LOC108258922,LOC108439361,LOC107564279,LOC107692629,LOC107665976
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 14223980 ~ 14244056 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674747.1
GCCGGGCTGTGATAGGCCGTATCGGAGGGAGGAGAGCTGGAGTGAAGACCCGGCGCGGTGACACTCCGAGACTCCGCTCAGAATCAGacctcctgcagctctgctcACTGACCGCCATGAGCTGCTCCAGACTGTGCCTCCGGCTGCAGCAGCGCCGCGGATACTCCAGCAGCCTGCGGGCCGCTTACCACCGGACCCTGGACCGAGTGGAGCTCATGCTGCCGCCCAGACTGAGACCCCTGTACAACCACCCGGCAGgGCCAAAGACGGTTTTCTTCTGGGCTCCTGTTTTTAAATGGGGCTTGGTTTTTGCTGGTTTTTCTGATATGACCCGCCCACCTGAAAAACTGAGTCTCTCTCAGTCATGTGTCATCACAGCAACAGGATTTATTTGGTCCAGGTACTGCCTGGTGATCATTCCCAAGAACTGGGCCCTCTTTGCAGTGAACTTCTTTCTGGGGATGTGTGGAACCATTCAGCTCTTCAGGATCTGGAGGTATAACCAGGAGTTAAAGCTGAAGGAAGGCGTGCAGCAGTCCTGAAGGGTTAACTGGGTACAGTAAGAATAAACTGAGTATAAAtgggagacagagggagaatCTGATTGAGTTATTCACTGGCTGCTTAGAGAAATTAGTTCTAgattaattttcttttcttatactTGGTCACATGTGCTGTTGTCTGACTGGGGCAGTATTATCTGGGAGGGGTTACTCTAGAGACTTCCTGTGTATTTTTAGCCGTCTTCCACACACTGGTGTGTTCAGCACTTCCCCCTGTTCTCCCTGGGTGTGATTTTATTCCGCAGGGATAAATGTGCTGGTGTAACCGAGTATTAGAGGAGAAATGGTGCATTAAATCATTTTTGGCTCCGGGAGCTTATGTTCTGtactgttttctttatttgttactGAAAATGCCACTAATCCAAGGGTTGCACCAAATTTTTACAATTGCTGCAGTATTTATATTCACTGTTTAATTAATGCTGTGTTGACATGCTGAAGTTTTGACCCAAAACATGATCTCTGAGGTCTGATTAAATGAAATAGAATTGttatatcattgaaaatgttcttttaatgATCAGGTAATTAAATGCATTGCAGTGCATGGGATGAACAACACTGTAATATCATTGTACTTGAATTGGTCATGCCTTTAGTCATGAAAAATCTGTATGTTACTGAGCAATAAATAAAGTTCTTACTCTTAA

Function

NR:

description
PREDICTED: mitochondrial pyruvate carrier 2-like

GO:

id name namespace
GO:0006850 mitochondrial pyruvate transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component

KEGG:

id description
K22139 MPC2; mitochondrial pyruvate carrier 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674747.1 True 1219 mRNA 0.46 5 14223980 14244056

Neighbor

gene id symbol gene type direction distance location
LOC111193619 NA coding upstream 162437 14051804 ~ 14061543 (+)
eif3f eif3f,LOC107723164,LOC107758850,LOC107665937 coding upstream 296182 13921248 ~ 13927798 (+)
LOC103047056 npy2rl,LOC108439369,LOC107758849,LOC107590775,LOC107714138,LOC107665946,LOC107692719 coding upstream 418751 13773430 ~ 13805229 (+)
LOC103023349 LOC108439383,LOC108258976 coding upstream 543759 13676444 ~ 13680221 (+)
LOC103023667 LOC108439371 coding upstream 547623 13673298 ~ 13676357 (+)
LOC103031172 LOC103031172,LOC108439360 coding downstream 38871 14282927 ~ 14290159 (+)
LOC103031792 LOC108439359,LOC107723198,LOC107564241,LOC107692626,LOC100334711 coding downstream 64870 14308926 ~ 14330415 (+)
knl1 NA coding downstream 144402 14388458 ~ 14409396 (+)
dmd LOC108439357 coding downstream 166627 14410683 ~ 14664759 (+)
LOC103039857 caly,LOC103039857,LOC108434710,LOC108258305,LOC105891014,LOC107583165,LOC107684294 coding downstream 1991972 16236028 ~ 16254238 (+)
G103464 NA non-coding upstream 24404 14199037 ~ 14199576 (+)
G103410 NA non-coding upstream 94227 14119738 ~ 14129753 (+)
G103389 NA non-coding upstream 144728 14024292 ~ 14079252 (+)
LOC111193479 NA non-coding upstream 161973 14061669 ~ 14062007 (+)
G103349 NA non-coding upstream 313637 13888907 ~ 13910343 (+)
G103482 NA non-coding downstream 5064 14249120 ~ 14249825 (+)
G103485 NA non-coding downstream 10314 14254370 ~ 14254846 (+)
G103488 NA non-coding downstream 14768 14258824 ~ 14259426 (+)
G103491 NA non-coding downstream 17547 14261603 ~ 14261978 (+)
G103477 NA non-coding downstream 46712 14290768 ~ 14291254 (+)
G103376 zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776 other upstream 288313 13929065 ~ 13935667 (+)
sh3pxd2a sh3pxd2a other upstream 1191474 12851001 ~ 13032506 (+)
cryzl1 cryzl1 other upstream 1701677 12483622 ~ 12522303 (+)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 2199216 12000639 ~ 12024764 (+)
map2k7 map2k7,LOC107676852,LOC107712243 other upstream 2929165 11274746 ~ 11294815 (+)
G103490 LOC106510829 other downstream 16569 14260625 ~ 14261539 (+)
G103551 NA other downstream 374579 14618635 ~ 14619082 (+)
G103561 NA other downstream 446987 14691043 ~ 14692199 (+)
LOC103032764 LOC108443686,LOC108258285,LOC107746061,LOC107684317,LOC107566138,LOC105891017,LOC107690754,LOC107086972 other downstream 755399 14999455 ~ 15297939 (+)
G104000 NA other downstream 2207119 16451175 ~ 16458209 (+)

Expression


Co-expression Network