Item | Value |
---|---|
gene id | nrp2 |
gene name | nrp2,nrp2a,LOC107556288,LOC107750056,LOC107749808 |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035908.1 |
NCBI id | CM008311.1 |
chromosome length | 31403898 |
location | 21417436 ~ 21561654 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
nrp2a | Enables identical protein binding activity. Acts upstream of or within neural crest cell migration; regulation of vascular endothelial growth factor receptor signaling pathway; and vasculogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in axial vasculature; cranial neural crest cell; fin bud; and nervous system. Orthologous to human NRP2 (neuropilin 2). |
nrp2 | Enables identical protein binding activity. Predicted to be involved in nervous system development and outflow tract septum morphogenesis. Predicted to act upstream of or within several processes, including axon guidance; cellular response to leukemia inhibitory factor; and neural crest cell migration. Predicted to be located in plasma membrane. Predicted to be active in glutamatergic synapse. Predicted to be integral component of postsynaptic membrane. |
description |
---|
PREDICTED: neuropilin-2 isoform X3 |
id | name | namespace |
---|---|---|
GO:0030947 | regulation of vascular endothelial growth factor receptor signaling pathway | biological_process |
GO:0001755 | neural crest cell migration | biological_process |
GO:0038084 | vascular endothelial growth factor signaling pathway | biological_process |
GO:0001525 | angiogenesis | biological_process |
GO:0001570 | vasculogenesis | biological_process |
GO:0007411 | axon guidance | biological_process |
GO:0007155 | cell adhesion | biological_process |
GO:0016020 | membrane | cellular_component |
GO:0017154 | semaphorin receptor activity | molecular_function |
GO:0005021 | vascular endothelial growth factor-activated receptor activity | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_022674882.1 | False | 5219 | mRNA | 0.52 | 17 | 21417438 | 21561654 |
XM_022674883.1 | False | 5187 | mRNA | 0.52 | 16 | 21417437 | 21561654 |
XM_022674884.1 | True | 5277 | mRNA | 0.53 | 16 | 21417436 | 21550327 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
mdh1b | NA | coding | upstream | 460403 | 20944945 ~ 20957033 (+) |
LOC103031253 | hecw2,LOC107676038,LOC108258347,LOC107674007,LOC107706834 | coding | upstream | 508661 | 20860945 ~ 20908775 (+) |
gtf3c3 | gtf3c3,LOC107750061 | coding | upstream | 590161 | 20804054 ~ 20827275 (+) |
LOC103029333 | LOC108437114,LOC108258365 | coding | upstream | 616905 | 20783070 ~ 20800531 (+) |
LOC103029654 | LOC108437114,LOC108258365 | coding | upstream | 643107 | 20765742 ~ 20774329 (+) |
LOC103037976 | LOC103037976,LOC108437127 | coding | downstream | 49918 | 21611572 ~ 21616436 (+) |
LOC103035679 | NA | coding | downstream | 364695 | 21926349 ~ 21934395 (+) |
LOC103046323 | LOC108441470 | coding | downstream | 751572 | 22313226 ~ 22480428 (+) |
LOC111193458 | NA | coding | downstream | 947792 | 22509446 ~ 22517576 (+) |
alkbh5 | alkbh5 | coding | downstream | 1030984 | 22592638 ~ 22599854 (+) |
G105363 | NA | non-coding | upstream | 206450 | 21210733 ~ 21210986 (+) |
G105311 | NA | non-coding | upstream | 401952 | 21013183 ~ 21015484 (+) |
G105305 | NA | non-coding | upstream | 411582 | 21003745 ~ 21005854 (+) |
G105303 | NA | non-coding | upstream | 412798 | 21000139 ~ 21004638 (+) |
G105300 | cnppd1,LOC107549439,LOC107676054,LOC107750058 | non-coding | upstream | 418063 | 20995759 ~ 20999373 (+) |
G105409 | NA | non-coding | downstream | 30188 | 21591842 ~ 21592052 (+) |
G105456 | NA | non-coding | downstream | 106198 | 21667852 ~ 21668149 (+) |
G105470 | NA | non-coding | downstream | 266170 | 21827824 ~ 21833705 (+) |
G105479 | NA | non-coding | downstream | 336322 | 21897976 ~ 21900325 (+) |
G105484 | NA | non-coding | downstream | 356334 | 21917988 ~ 21920210 (+) |
G105357 | NA | other | upstream | 48232 | 21327192 ~ 21369204 (+) |
G105276 | NA | other | upstream | 361953 | 20989273 ~ 21055483 (+) |
G105312 | abcb6,abcb6a,LOC107556273,LOC107750068 | other | upstream | 388446 | 21019038 ~ 21028990 (+) |
nfkbiz | nfkbiz | other | upstream | 1672512 | 19734226 ~ 19744924 (+) |
G104656 | pcdh8 | other | upstream | 2494233 | 18919060 ~ 18923203 (+) |
LOC103046939 | LOC107701771,LOC107725347,LOC107565259 | other | downstream | 693431 | 22255085 ~ 22283453 (+) |
LOC103045705 | LOC107725350,LOC107692700,LOC108439093,LOC107565240,LOC108441473 | other | downstream | 963603 | 22525257 ~ 22588961 (+) |
LOC103038624 | zgc:77849,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708,LOC107564565 | other | downstream | 1248425 | 22810079 ~ 22820096 (+) |
G106017 | si:ch73-12o23.1,LOC108439175,LOC108258846,LOC107722961,LOC107590719 | other | downstream | 2353981 | 23915635 ~ 23923771 (+) |
G106036 | NA | other | downstream | 2425553 | 23987207 ~ 23989592 (+) |