LOC103046391


Basic Information

Item Value
gene id LOC103046391
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 27729513 ~ 27739098 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674942.1
atcATCTCTCTGTAGCGTCAGGGTTACAGCAGACCAACAGAGCACTGAGACACAGTGGAGATCTTCAGAACTCCTGAACTCCAGTACTTCTGAGCTTTTGTGCTTCTGAGAGGAGAAGATTAAAGACAGAATGATGTTTAGCTCAGTATTGGCTTTATTAATACTTCTGAACCTGCAACCTCAGATCAGGGCAGTGGAAGGCCTGGATCTACGAGCTTATGACTACACCAAGTACCACACCATGGACGagATCTCaggctggatgcagcagatGGAGAAAGATTATCCTGAGGTTGTATCTAGTGTGATATACGGAACCACGTACGAGAAGAGGAACATCACCCTGCTGAAGATCGGGTTAAACAGCACAGAGCTGAAGAAGGGGATCTGGATGGATTGTGGGATTCATGGTAATGAATGGATTTCTCCTGCTTTCTGTCAGTATTTCATAAAACAGATCCTGAGCTCTTACAAAACTGACCCAAAAATGGGTGAGATATTTAAGAACCTGGATTTCTACATCACTCCAGTTTTGAACAGGGACGGGTACACATACTCCTGGAAAGATAACATGACTCGTCAGTGGAGGAAGAACAGGTCCCCAGGTACCGGCAACTGCACATGCTACGGCACCGACATCAACCGCAACTTTAACGTCAACTGGGGAACCGTGGGAGTGTCTAAACTGTGCTGCATCGGGATGTATTGCGGTCCGTCCGTCCTCTCAGAGCTGGAGTCCAGAGCCGTCACTGAATTTCTGGAGTCTAATCGGAACAGAATTCTGTTATTTCTGACCGTCCACTCTTTCGGTCAGCTGATTCTACTTCCCTACGGACACTCCAGTGTTTCAGTCCCCAACTATGAAGAACTGATGGAGGTGGGTCAGGCTGCAGCAAAGGCCATCAAATCCGTTCACGGAATGGACTACACTGTGGGCGCAGCGTCGGATGTGATGTATCAGACGTCGGGTTCTTCGCGGGATTTTGCTCGTCTGATCGGGATCCCGTTCGTCTTCACCTTCGAGCTCAGAGACAAGGGCGAGTTCGGCTTCAAACTGCCTGAAGATCAGATCCAGCCCACCTGTGAGGAGGCTTACCAGGGGGCGCTGTCCATCATCACCACTGTCCACGACAAGACCTTCACCAGCGCCGCGTTCACCATAACAGCCACACTGTGGACCACGCTGACCGCCGCCTGCCTCTCTACCGCCACCTGGGTGTAATTGCATGGGAAATGACTGTTGCGCTGTAAATTTACAGTGTtcctttgctttcttttttttctgttaataaaatgaataattttgcTTGAATTT

Function

GO: NA

KEGG:

id description
K23009 CPO; carboxypeptidase O

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674942.1 True 1315 mRNA 0.49 9 27729513 27739098

Neighbor

gene id symbol gene type direction distance location
atic atic,pur9,LOC107556291,LOC107674004,LOC107750210 coding upstream 125282 27588049 ~ 27604231 (+)
LOC111193487 NA coding upstream 1086303 26638967 ~ 26643210 (+)
slitrk1 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding upstream 1214275 26511121 ~ 26515238 (+)
LOC111193566 NA coding upstream 1474636 26250173 ~ 26254877 (+)
LOC103039973 NA coding upstream 1481166 26245239 ~ 26248347 (+)
LOC111193461 cpo,LOC108258336 coding downstream 5990 27745088 ~ 27758097 (+)
arglu1 NA coding downstream 20114 27759212 ~ 27768267 (+)
LOC103047315 LOC108440455 coding downstream 62986 27802084 ~ 27808084 (+)
LOC103043862 mx1 coding downstream 151620 27890718 ~ 27905645 (+)
LOC111193463 NA coding downstream 254901 27993999 ~ 27999852 (+)
G106572 NA non-coding upstream 95303 27630943 ~ 27634210 (+)
G106562 NA non-coding upstream 104812 27583377 ~ 27624701 (+)
G106564 NA non-coding upstream 118899 27609381 ~ 27610614 (+)
G106557 NA non-coding upstream 157867 27571336 ~ 27571646 (+)
G106555 NA non-coding upstream 159322 27569987 ~ 27570191 (+)
G106636 NA non-coding downstream 87489 27826587 ~ 27826848 (+)
G106644 NA non-coding downstream 166687 27905785 ~ 27906285 (+)
G106646 NA non-coding downstream 167858 27906956 ~ 27907211 (+)
G106648 NA non-coding downstream 173208 27912306 ~ 27914261 (+)
G106642 NA non-coding downstream 176449 27915547 ~ 27918196 (+)
LOC103037236 NA other upstream 1557712 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 2158692 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 2360074 25361744 ~ 25369439 (+)
G106146 NA other upstream 3316415 24411208 ~ 24413098 (+)
G106036 NA other upstream 3739921 23987207 ~ 23989592 (+)
G106661 lancl1 other downstream 275418 28014516 ~ 28022047 (+)
G106673 NA other downstream 327254 28066352 ~ 28066983 (+)
LOC103027743 NA other downstream 963969 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 1409967 29149065 ~ 29159680 (+)
G107117 NA other downstream 2041228 29780326 ~ 29780927 (+)

Expression


Co-expression Network