Gene
RNA
| Item | Value |
|---|---|
| gene id | G54488 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 6632801 ~ 6633000 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62017 | True | 200 | lncRNA | 0.46 | 1 | 6632801 | 6633000 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_06253421_06255264 | NA | coding | downstream | 376855 | 6253421 ~ 6255946 (-) |
| CI01000009_06250463_06251001 | NA | coding | downstream | 381800 | 6250286 ~ 6251001 (-) |
| CI01000009_06246303_06248176 | SLC10A2 | coding | downstream | 384625 | 6245570 ~ 6248176 (-) |
| CI01000009_06237366_06242607 | NA | coding | downstream | 390174 | 6237158 ~ 6242627 (-) |
| CI01000009_06228655_06235149 | NA | coding | downstream | 396184 | 6227678 ~ 6236617 (-) |
| CI01000009_06891877_06908223 | EFNB2A, EFNB2 | coding | upstream | 258241 | 6891241 ~ 6908223 (-) |
| CI01000009_06913437_06917631 | NA | coding | upstream | 279470 | 6912470 ~ 6917631 (-) |
| CI01000009_07020336_07047155 | NA | coding | upstream | 387315 | 7020315 ~ 7048177 (-) |
| CI01000009_07064060_07084764 | ZEB2A | coding | upstream | 430797 | 7063797 ~ 7085218 (-) |
| CI01000009_07224625_07229839 | NA | coding | upstream | 591316 | 7224316 ~ 7230651 (-) |
| G54417 | NA | non-coding | downstream | 58633 | 6573910 ~ 6574168 (-) |
| G54411 | NA | non-coding | downstream | 62967 | 6569625 ~ 6569834 (-) |
| G54387 | NA | non-coding | downstream | 97484 | 6535094 ~ 6535317 (-) |
| G54156 | NA | non-coding | downstream | 102522 | 6465974 ~ 6530279 (-) |
| G54137 | NA | non-coding | downstream | 428002 | 6204411 ~ 6204799 (-) |
| G54499 | NA | non-coding | upstream | 15087 | 6648087 ~ 6648291 (-) |
| G54836 | NA | non-coding | upstream | 318207 | 6951207 ~ 6951423 (-) |
| G54839 | NA | non-coding | upstream | 319942 | 6952942 ~ 6953189 (-) |
| G54849 | NA | non-coding | upstream | 328953 | 6961953 ~ 6962172 (-) |
| G54877 | NA | non-coding | upstream | 483374 | 7116374 ~ 7116639 (-) |
| G53515 | NA | other | downstream | 1127553 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 2401332 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 3370844 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 3733394 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 4070268 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 1792821 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 2225152 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 5655217 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 7342388 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 7400564 | 14033564 ~ 14037873 (-) |
