Gene
RNA
| Item | Value |
|---|---|
| gene id | G54627 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 6805307 ~ 6913596 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62163 | False | 1214 | lncRNA | 0.37 | 3 | 6805307 | 6913596 |
| TU62164 | False | 1203 | lncRNA | 0.37 | 3 | 6805307 | 6913596 |
| TU62168 | False | 1306 | lncRNA | 0.37 | 3 | 6827467 | 6913596 |
| TU62162 | False | 1173 | lncRNA | 0.38 | 2 | 6885363 | 6913596 |
| TU62165 | False | 1444 | lncRNA | 0.37 | 2 | 6912123 | 6913596 |
| TU62166 | True | 1454 | lncRNA | 0.37 | 2 | 6912123 | 6913596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_06212264_06213131 | NA | coding | upstream | 591492 | 6212264 ~ 6213815 (+) |
| CI01000009_06205817_06207701 | TEX30 | coding | upstream | 597596 | 6205817 ~ 6207711 (+) |
| CI01000009_06195742_06204011 | KDELC1 | coding | upstream | 600958 | 6195742 ~ 6204349 (+) |
| CI01000009_06130188_06193279 | STXBP5L | coding | upstream | 611903 | 6130064 ~ 6193404 (+) |
| CI01000009_06002120_06017019 | GTF2E1 | coding | upstream | 787525 | 6002120 ~ 6017782 (+) |
| CI01000009_06943591_06952628 | NA | coding | downstream | 28028 | 6941624 ~ 6953067 (+) |
| CI01000009_06975071_07009147 | ARHGAP15 | coding | downstream | 61475 | 6975071 ~ 7009417 (+) |
| CI01000009_07051811_07054331 | NA | coding | downstream | 137122 | 7050718 ~ 7054625 (+) |
| CI01000009_07091022_07092696 | NA | coding | downstream | 177322 | 7090918 ~ 7092801 (+) |
| CI01000009_07101768_07105835 | NA | coding | downstream | 187673 | 7101269 ~ 7106009 (+) |
| G54433 | NA | non-coding | upstream | 172529 | 6632544 ~ 6632778 (+) |
| G53903 | NA | non-coding | upstream | 228165 | 6576716 ~ 6577142 (+) |
| G53901 | NA | non-coding | upstream | 234694 | 6570411 ~ 6570613 (+) |
| G53890 | NA | non-coding | upstream | 267924 | 6537149 ~ 6537383 (+) |
| G53886 | NA | non-coding | upstream | 275038 | 6519899 ~ 6530269 (+) |
| G54687 | NA | non-coding | downstream | 32227 | 6945823 ~ 6946041 (+) |
| G54694 | NA | non-coding | downstream | 44123 | 6957719 ~ 6957928 (+) |
| CI01000009_07111833_07115320 | NA | non-coding | downstream | 157155 | 7110351 ~ 7115443 (+) |
| G54752 | NA | non-coding | downstream | 206899 | 7120495 ~ 7120779 (+) |
| G54779 | NA | non-coding | downstream | 243285 | 7156881 ~ 7157158 (+) |
| G53651 | NA | other | upstream | 556915 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 872506 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 1266253 | 5522242 ~ 5540638 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 3596323 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 3742720 | 3062033 ~ 3062587 (+) |
| G56100 | NA | other | downstream | 2215704 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 2939763 | 9853929 ~ 9856587 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 4847190 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 5020346 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 5518962 | 12432538 ~ 12436017 (+) |
