Item | Value |
---|---|
gene id | G54626 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000009 |
NCBI id | null |
chromosome length | 16003125 |
location | 6896121 ~ 6940792 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU62160 | False | 1774 | lncRNA | 0.41 | 3 | 6896121 | 6940792 |
TU62156 | False | 2974 | lncRNA | 0.43 | 2 | 6915187 | 6919876 |
TU62158 | False | 2527 | lncRNA | 0.42 | 3 | 6915187 | 6940792 |
TU62159 | True | 2934 | lncRNA | 0.44 | 3 | 6915187 | 6919876 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000009_06212264_06213131 | NA | coding | upstream | 682306 | 6212264 ~ 6213815 (+) |
CI01000009_06205817_06207701 | TEX30 | coding | upstream | 688410 | 6205817 ~ 6207711 (+) |
CI01000009_06195742_06204011 | KDELC1 | coding | upstream | 691772 | 6195742 ~ 6204349 (+) |
CI01000009_06130188_06193279 | STXBP5L | coding | upstream | 702717 | 6130064 ~ 6193404 (+) |
CI01000009_06002120_06017019 | GTF2E1 | coding | upstream | 878339 | 6002120 ~ 6017782 (+) |
CI01000009_06943591_06952628 | NA | coding | downstream | 832 | 6941624 ~ 6953067 (+) |
CI01000009_06975071_07009147 | ARHGAP15 | coding | downstream | 34279 | 6975071 ~ 7009417 (+) |
CI01000009_07051811_07054331 | NA | coding | downstream | 109926 | 7050718 ~ 7054625 (+) |
CI01000009_07091022_07092696 | NA | coding | downstream | 150126 | 7090918 ~ 7092801 (+) |
CI01000009_07101768_07105835 | NA | coding | downstream | 160477 | 7101269 ~ 7106009 (+) |
G54433 | NA | non-coding | upstream | 263343 | 6632544 ~ 6632778 (+) |
G53903 | NA | non-coding | upstream | 318979 | 6576716 ~ 6577142 (+) |
G53901 | NA | non-coding | upstream | 325508 | 6570411 ~ 6570613 (+) |
G53890 | NA | non-coding | upstream | 358738 | 6537149 ~ 6537383 (+) |
G53886 | NA | non-coding | upstream | 365852 | 6519899 ~ 6530269 (+) |
G54687 | NA | non-coding | downstream | 5031 | 6945823 ~ 6946041 (+) |
G54694 | NA | non-coding | downstream | 16927 | 6957719 ~ 6957928 (+) |
CI01000009_07111833_07115320 | NA | non-coding | downstream | 129959 | 7110351 ~ 7115443 (+) |
G54752 | NA | non-coding | downstream | 179703 | 7120495 ~ 7120779 (+) |
G54779 | NA | non-coding | downstream | 216089 | 7156881 ~ 7157158 (+) |
G53651 | NA | other | upstream | 647729 | 6245564 ~ 6248392 (+) |
CI01000009_05931829_05943829 | KCNH3 | other | upstream | 963320 | 5931718 ~ 5943899 (+) |
G53388 | NA | other | upstream | 1357067 | 5522242 ~ 5540638 (+) |
CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 3687137 | 3202207 ~ 3208984 (+) |
G51529 | NA | other | upstream | 3833534 | 3062033 ~ 3062587 (+) |
G56100 | NA | other | downstream | 2188508 | 9129300 ~ 9130286 (+) |
CI01000009_09853929_09854476 | SAP18 | other | downstream | 2912567 | 9853929 ~ 9856587 (+) |
CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 4819994 | 11761606 ~ 11766944 (+) |
G57811 | NA | other | downstream | 4993150 | 11933942 ~ 11935251 (+) |
CI01000009_12432736_12435509 | NA | other | downstream | 5491766 | 12432538 ~ 12436017 (+) |