G164194


Basic Information

Item Value
gene id G164194
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 702281 ~ 716718 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU222322
gattttgtcaggtattgtcataaatatttacacataacttatatctctcctgaaaagcttttattttagtcagaaacacgcttgtgtttactttatctgagagaaagatgtttttttaattcaatggaaagcaacaggtgtagtcaattataagtttaagatttttaatccacctcactgtgatctatagtcagtgttctcaagtcacactgacacacgcatttcagcgagttcacacgctctcacctgcgcgcacccacccctccgttagatacagatacaaaacctgcgcgcccaacccccgccccccctcccccgttggacagataaaaacagtgatcacactcccgccgactgcgctcatgcagtggctatctctatttaaatgaataggatgcgctgtgttggtgccgcgccatttgcgtagcgcgctgcgctatttgcgtagcgcgcgcgggagggatcgtcgatcctctttttgacttcgatactcgagatcgtgacctcatttcgattcgatttcgataaaatatcgagatcgtgacacccctaATTTTAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222322 True 563 lncRNA 0.45 2 702281 716718

Neighbor

gene id symbol gene type direction distance location
tbr1 tbr1,LOC106511624 coding upstream 35477 660601 ~ 666804 (+)
tank NA coding upstream 75655 613090 ~ 626626 (+)
tanc1 tanc1,LOC108266469 coding upstream 335433 184448 ~ 366848 (+)
cers6 cers6,LOC107564136,LOC107677898 coding upstream 545227 105214 ~ 157054 (+)
LOC103030276 LOC103030276 coding downstream 1002574 1719292 ~ 1724952 (+)
LOC103029311 NA coding downstream 1058733 1775451 ~ 1783041 (+)
LOC103028997 NA coding downstream 1067160 1783878 ~ 1796747 (+)
ehhadh NA coding downstream 1089677 1806395 ~ 1822220 (+)
nup35 nup35,LOC106582498,LOC107749876 coding downstream 1153768 1870486 ~ 1878855 (+)
G164123 rbms1,LOC108266580,LOC105908026 non-coding upstream 182109 507845 ~ 520172 (+)
G164118 NA non-coding upstream 215542 485934 ~ 486739 (+)
G164253 kcnh7,LOC106917580,LOC103474219,LOC101482208 non-coding downstream 123163 839881 ~ 845477 (+)
G164276 NA non-coding downstream 227879 944597 ~ 944874 (+)
G164282 NA non-coding downstream 235347 952065 ~ 952429 (+)
G164284 NA non-coding downstream 272579 989297 ~ 989513 (+)
G164376 NA non-coding downstream 990163 1706881 ~ 1708641 (+)
G164126 NA other upstream 130088 538279 ~ 572193 (+)
nostrin nostrin other upstream 527356 131108 ~ 174925 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other downstream 687383 1404101 ~ 1496380 (+)
tspear tspear other downstream 1027688 1744406 ~ 1760560 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other downstream 1086069 1802787 ~ 1838087 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other downstream 1773326 2490044 ~ 2492991 (+)
LOC103021746 LOC108436791,LOC107721608 other downstream 4551321 5268039 ~ 5298728 (+)

Expression


Co-expression Network