G164282


Basic Information

Item Value
gene id G164282
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 952065 ~ 952429 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU222432
gcagcaaaggacgaggacgtgaatcacttatctaaccagcctgtactgatttctgcccccaataaccctttcaataacctccaatagcctttaatagtcttcagtagccttcaacagtctaaccttgcagccgtgtttttaatgtaatccgagcagtgactccgggacggctgctctaaactgctgctgttagctgcttgggctgaaagatgaactgtagagagctgtattatccgtttagtggggttaaaacctttatttcctacacagaaaactgtaaaaaaaaaaaaacgctccagactggctcagctgagccctgtagcccgtggctgggctgtagctctgactgagtaaagacagcgggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222432 True 365 lncRNA 0.47 1 952065 952429

Neighbor

gene id symbol gene type direction distance location
slc4a10 slc4a10,LOC557642,LOC107674766,LOC107730592,LOC107722898 coding upstream 201579 675060 ~ 750486 (+)
tbr1 tbr1,LOC106511624 coding upstream 285261 660601 ~ 666804 (+)
tank NA coding upstream 325439 613090 ~ 626626 (+)
tanc1 tanc1,LOC108266469 coding upstream 585217 184448 ~ 366848 (+)
cers6 cers6,LOC107564136,LOC107677898 coding upstream 795011 105214 ~ 157054 (+)
LOC103030276 LOC103030276 coding downstream 766863 1719292 ~ 1724952 (+)
LOC103029311 NA coding downstream 823022 1775451 ~ 1783041 (+)
LOC103028997 NA coding downstream 831449 1783878 ~ 1796747 (+)
ehhadh NA coding downstream 853966 1806395 ~ 1822220 (+)
nup35 nup35,LOC106582498,LOC107749876 coding downstream 918057 1870486 ~ 1878855 (+)
G164276 NA non-coding upstream 7191 944597 ~ 944874 (+)
G164253 kcnh7,LOC106917580,LOC103474219,LOC101482208 non-coding upstream 106588 839881 ~ 845477 (+)
G164194 NA non-coding upstream 235347 702281 ~ 716718 (+)
G164123 rbms1,LOC108266580,LOC105908026 non-coding upstream 431893 507845 ~ 520172 (+)
G164118 NA non-coding upstream 465326 485934 ~ 486739 (+)
G164284 NA non-coding downstream 36868 989297 ~ 989513 (+)
G164376 NA non-coding downstream 754452 1706881 ~ 1708641 (+)
G164400 NA non-coding downstream 924015 1876444 ~ 1877085 (+)
G164404 NA non-coding downstream 950637 1903066 ~ 1906873 (+)
G164475 NA non-coding downstream 1163414 2115843 ~ 2118502 (+)
G164126 NA other upstream 379872 538279 ~ 572193 (+)
nostrin nostrin other upstream 777140 131108 ~ 174925 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other downstream 451672 1404101 ~ 1496380 (+)
tspear tspear other downstream 791977 1744406 ~ 1760560 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other downstream 850358 1802787 ~ 1838087 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other downstream 1537615 2490044 ~ 2492991 (+)
LOC103021746 LOC108436791,LOC107721608 other downstream 4315610 5268039 ~ 5298728 (+)

Expression


Co-expression Network