G164376


Basic Information

Item Value
gene id G164376
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 1706881 ~ 1708641 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU222562
ACTGAAACcatttctctccagtgtgaattttcTGGTGTTTGTTTAGATTACTTTGGTCGCCGAAACTCTTCCCACACACTGAGCAGTGATAGGGTTTTTCGCCCGTGTGGATGTGCTGGTGTTCCTGGAGGTGACTCTGTCGAGTAAAGCTCTTCCCGCACTTTGAGCAGACGTACGGTTTCTCgccagtgtgaacgcgctggtgtctGTGGAGATTACCCAGTTGAGCAtaactcttcccacactctgagcactggtacggtttctctccggtgtgaatgcgctgatgggTTCTGAGGTTACTTTCACAGGTAAAACTCTTCCCATCTCCACATTCAGAGCAGTGGTAACTTCTCTTCTTTGGTGGTGATATTTGTTGCTGATTGGATTCCATGCTCTCAAATTTTGCTTCAATTCAGTTCAGTAGTCTGATGTTTCCTCTTGTCATTATTTCTCAACTTGTTTTTGAAGACAGTTTGTGAAAAAGTTGAATCTTTATCCTACTTCATCACAGCAGAGCTCCTCTActgctcctcttcctctgcAGAAGCTCTATGGAGAACCGCTCTCATACAGCAGACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222562 True 584 lncRNA 0.46 2 1706881 1708641

Neighbor

gene id symbol gene type direction distance location
slc4a10 slc4a10,LOC557642,LOC107674766,LOC107730592,LOC107722898 coding upstream 956395 675060 ~ 750486 (+)
tbr1 tbr1,LOC106511624 coding upstream 1040077 660601 ~ 666804 (+)
tank NA coding upstream 1080255 613090 ~ 626626 (+)
tanc1 tanc1,LOC108266469 coding upstream 1340033 184448 ~ 366848 (+)
cers6 cers6,LOC107564136,LOC107677898 coding upstream 1549827 105214 ~ 157054 (+)
LOC103030276 LOC103030276 coding downstream 10651 1719292 ~ 1724952 (+)
LOC103029311 NA coding downstream 66810 1775451 ~ 1783041 (+)
LOC103028997 NA coding downstream 75237 1783878 ~ 1796747 (+)
ehhadh NA coding downstream 97754 1806395 ~ 1822220 (+)
nup35 nup35,LOC106582498,LOC107749876 coding downstream 161845 1870486 ~ 1878855 (+)
G164284 NA non-coding upstream 717368 989297 ~ 989513 (+)
G164282 NA non-coding upstream 754452 952065 ~ 952429 (+)
G164276 NA non-coding upstream 762007 944597 ~ 944874 (+)
G164253 kcnh7,LOC106917580,LOC103474219,LOC101482208 non-coding upstream 861404 839881 ~ 845477 (+)
G164194 NA non-coding upstream 990163 702281 ~ 716718 (+)
G164400 NA non-coding downstream 167803 1876444 ~ 1877085 (+)
G164404 NA non-coding downstream 194425 1903066 ~ 1906873 (+)
G164475 NA non-coding downstream 407202 2115843 ~ 2118502 (+)
G164479 NA non-coding downstream 470461 2179102 ~ 2180592 (+)
G164467 NA non-coding downstream 484174 2192815 ~ 2193188 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other upstream 210501 1404101 ~ 1496380 (+)
G164126 NA other upstream 1134688 538279 ~ 572193 (+)
nostrin nostrin other upstream 1531956 131108 ~ 174925 (+)
tspear tspear other downstream 35765 1744406 ~ 1760560 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other downstream 94146 1802787 ~ 1838087 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other downstream 781403 2490044 ~ 2492991 (+)
LOC103021746 LOC108436791,LOC107721608 other downstream 3559398 5268039 ~ 5298728 (+)
LOC107196936 NA other downstream 4408723 6117364 ~ 6123051 (+)

Expression


Co-expression Network