G164467


Basic Information

Item Value
gene id G164467
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 2192815 ~ 2193188 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU222695
acacacatgtaaacCATTCCCTGTGTTGATTGGTTGGAGAACAAGCGGGCAGTTGGGGTATTTTTGCGCTTCGTCGGCGCTCTGGAGCTTTGCGTGAATTAAAAAAGTGGTCTGAGCCGATGTAATTCCTTCCTTCATTTATTTCCAGTCGATGtctttcctcttttctttccttctttcctccTGAGGAAGATAATAGCCCTATTATCCTCCAGTCGGGAAATCACTTTACGGCCCAAATTGATTGgagcactaataataataataatgaaaatccCAGATTTATTCGGAGACGTTGAGCAGGGAGATTCTGTGGAGTAGCTTCAGTAAAGGTAGGGTAGGTCGTGTTAAATAAAGGATAAaaagaagaatat

Function

GO:

id name namespace
GO:0007610 behavior biological_process
GO:0030537 larval behavior biological_process
GO:0008345 larval locomotory behavior biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222695 True 374 lncRNA 0.41 1 2192815 2193188

Neighbor

gene id symbol gene type direction distance location
znf804a znf804a coding upstream 901 2093349 ~ 2191914 (+)
LOC111194854 NA coding upstream 310122 1880148 ~ 1882693 (+)
nup35 nup35,LOC106582498,LOC107749876 coding upstream 313960 1870486 ~ 1878855 (+)
ehhadh NA coding upstream 370595 1806395 ~ 1822220 (+)
LOC103028997 NA coding upstream 396068 1783878 ~ 1796747 (+)
LOC103024889 nxph2,LOC108413064 coding downstream 247468 2440656 ~ 2473897 (+)
kansl1l NA coding downstream 410870 2604058 ~ 2655714 (+)
map2 map2 coding downstream 467267 2660455 ~ 2875066 (+)
cps1 cps1 coding downstream 718819 2912007 ~ 3011890 (+)
LOC103033219 NA coding downstream 1846798 4039986 ~ 4043593 (+)
G164479 NA non-coding upstream 12223 2179102 ~ 2180592 (+)
G164475 NA non-coding upstream 74313 2115843 ~ 2118502 (+)
G164404 NA non-coding upstream 285942 1903066 ~ 1906873 (+)
G164400 NA non-coding upstream 315730 1876444 ~ 1877085 (+)
G164376 NA non-coding upstream 484174 1706881 ~ 1708641 (+)
G164498 NA non-coding downstream 34358 2227546 ~ 2227792 (+)
G164501 NA non-coding downstream 103345 2296533 ~ 2296987 (+)
G164510 NA non-coding downstream 178008 2371196 ~ 2371425 (+)
G164505 NA non-coding downstream 195440 2388628 ~ 2389777 (+)
G164516 NA non-coding downstream 205688 2398876 ~ 2402019 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other upstream 354728 1802787 ~ 1838087 (+)
tspear tspear other upstream 432255 1744406 ~ 1760560 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other upstream 696435 1404101 ~ 1496380 (+)
G164126 NA other upstream 1620622 538279 ~ 572193 (+)
nostrin nostrin other upstream 2017890 131108 ~ 174925 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other downstream 296856 2490044 ~ 2492991 (+)
LOC103021746 LOC108436791,LOC107721608 other downstream 3074851 5268039 ~ 5298728 (+)
LOC107196936 NA other downstream 3924176 6117364 ~ 6123051 (+)
G165406 NA other downstream 3951749 6144937 ~ 6145969 (+)
LOC111194881 NA other downstream 3967212 6160400 ~ 6237986 (+)

Expression


Co-expression Network