Gene
RNA
| Item | Value |
|---|---|
| gene id | G54900 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 7141729 ~ 7141964 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62467 | True | 236 | lncRNA | 0.53 | 1 | 7141729 | 7141964 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_07064060_07084764 | ZEB2A | coding | downstream | 56511 | 7063797 ~ 7085218 (-) |
| CI01000009_07020336_07047155 | NA | coding | downstream | 93552 | 7020315 ~ 7048177 (-) |
| CI01000009_06913437_06917631 | NA | coding | downstream | 224098 | 6912470 ~ 6917631 (-) |
| CI01000009_06891877_06908223 | EFNB2A, EFNB2 | coding | downstream | 233506 | 6891241 ~ 6908223 (-) |
| CI01000009_06253421_06255264 | NA | coding | downstream | 885783 | 6253421 ~ 6255946 (-) |
| CI01000009_07224625_07229839 | NA | coding | upstream | 82352 | 7224316 ~ 7230651 (-) |
| CI01000009_07383927_07391805 | ITM2B | coding | upstream | 241690 | 7383654 ~ 7391994 (-) |
| CI01000009_07500752_07541007 | LRCH1 | coding | upstream | 358638 | 7500602 ~ 7541007 (-) |
| CI01000009_07625693_07637462 | SLC39A10 | coding | upstream | 483590 | 7625554 ~ 7637462 (-) |
| CI01000009_07953250_07953748 | NA | coding | upstream | 810754 | 7952718 ~ 7954139 (-) |
| G54887 | NA | non-coding | downstream | 14145 | 7127362 ~ 7127584 (-) |
| G54878 | NA | non-coding | downstream | 22962 | 7118528 ~ 7118767 (-) |
| G54877 | NA | non-coding | downstream | 25090 | 7116374 ~ 7116639 (-) |
| G54849 | NA | non-coding | downstream | 179557 | 6961953 ~ 6962172 (-) |
| G54839 | NA | non-coding | downstream | 188540 | 6952942 ~ 6953189 (-) |
| G54917 | NA | non-coding | upstream | 14807 | 7156771 ~ 7157175 (-) |
| G55110 | NA | non-coding | upstream | 29133 | 7171097 ~ 7171518 (-) |
| G55121 | NA | non-coding | upstream | 40918 | 7182882 ~ 7183239 (-) |
| G55143 | NA | non-coding | upstream | 69968 | 7211932 ~ 7212295 (-) |
| G55151 | NA | non-coding | upstream | 80344 | 7222308 ~ 7222523 (-) |
| G53515 | NA | other | downstream | 1636481 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 2910260 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 3879772 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 4242322 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 4579196 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 1283857 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 1716188 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 5146253 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 6833424 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 6891600 | 14033564 ~ 14037873 (-) |
