G164902


Basic Information

Item Value
gene id G164902
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 4391382 ~ 4391679 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU223267
acaactgcgcaccctctccgcttttagactctttggtctgtttttctgcgctacaactgagcactctctccgcttttagactctttggtctgtttttctgcgctacaactgagcactctctccgcttttagactctttggtctgtttttctgcgctacaactgagcactctctccgcttttagactctttggtctgtttttctgcgctacaactgcgcactctctccgcttttagactctttggtctgtttttctgcgctacaactgagcactctctccgcttttagactctttggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223267 True 298 lncRNA 0.48 1 4391382 4391679

Neighbor

gene id symbol gene type direction distance location
LOC103033219 NA coding upstream 347789 4039986 ~ 4043593 (+)
cps1 cps1 coding upstream 1379492 2912007 ~ 3011890 (+)
map2 map2 coding upstream 1516316 2660455 ~ 2875066 (+)
kansl1l NA coding upstream 1735668 2604058 ~ 2655714 (+)
LOC103024889 nxph2,LOC108413064 coding upstream 1917485 2440656 ~ 2473897 (+)
hibch hibch coding downstream 279453 4671132 ~ 4734221 (+)
mstn mstn coding downstream 365065 4756744 ~ 4760314 (+)
ormdl1 ormdl1,LOC107602148 coding downstream 418869 4810548 ~ 4817692 (+)
osgepl1 osgepl1 coding downstream 430624 4822303 ~ 4827751 (+)
LOC103025618 LOC108436803 coding downstream 462724 4854403 ~ 4859014 (+)
G164893 NA non-coding upstream 42727 4348249 ~ 4348655 (+)
G164888 NA non-coding upstream 100818 4290316 ~ 4290564 (+)
G164845 NA non-coding upstream 381362 3967496 ~ 4010020 (+)
G164725 ikzf2 non-coding upstream 588783 3800336 ~ 3802599 (+)
G164718 NA non-coding upstream 711347 3650375 ~ 3680035 (+)
G164903 NA non-coding downstream 3633 4395312 ~ 4439720 (+)
G164899 NA non-coding downstream 58300 4449979 ~ 4491709 (+)
G164907 NA non-coding downstream 60369 4452048 ~ 4454815 (+)
G164910 NA non-coding downstream 110269 4501948 ~ 4503411 (+)
G164944 NA non-coding downstream 225124 4616803 ~ 4650893 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other upstream 1898391 2490044 ~ 2492991 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other upstream 2553295 1802787 ~ 1838087 (+)
tspear tspear other upstream 2630822 1744406 ~ 1760560 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other upstream 2895002 1404101 ~ 1496380 (+)
G164126 NA other upstream 3819189 538279 ~ 572193 (+)
LOC103021746 LOC108436791,LOC107721608 other downstream 876360 5268039 ~ 5298728 (+)
LOC107196936 NA other downstream 1725685 6117364 ~ 6123051 (+)
G165406 NA other downstream 1753258 6144937 ~ 6145969 (+)
LOC111194881 NA other downstream 1768721 6160400 ~ 6237986 (+)
wdr4 wdr4 other downstream 1948316 6339995 ~ 6345403 (+)

Expression


Co-expression Network