G165406


Basic Information

Item Value
gene id G165406
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 6144937 ~ 6145969 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU223959
AGTCATTCCCCACCTTTCTGACTCTGAGGGGCTGTGGTCTGATGTTCTGCTTTCAGAAACCCACTTCCTCTATCTTCAGACTCTCTGGGGCACTGCTAGAATTCAGCAGTAGTTCTCTTTACTAGCGCAGCACTGCTGAGCGCGTTAGAGTGAGAGACAGGTTTATTCACTCGCTCTGGGATCTGGGGAATGACATTGTTATGGCGCTTCTTCAGACTGGGGTTCTGCATCTGGGTCCCTGCATTATCGTCATGCTGCTGACTTGTGGAGatTTTTCAAATTCAAATACGCTGAACACATTTCACTGGATAAATGAAACTGCGGATGAGGGTGAAACTgttgttttatactgtaatgGAAGTGAAGATAGGGGAGAAGATTTTGTTTGGCGTAAGAAGAATGTTATTTTTATCTACAGCCCCCTTATTAACCAAACTGTAACAAACTACACATCAAGTAGTATGAGTGTAGATCCCAGTGATCCACGGAAACTACAGATATCTAACGTTCAGCCTTCAGACGCAGGAACCTATTACTGCTTCCCATCAAAAATTATATGGATTCTGACCATCAATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223959 True 577 TUCP 0.44 2 6144937 6145969

Neighbor

gene id symbol gene type direction distance location
nr1i2 NA coding upstream 282030 5835481 ~ 5862907 (+)
maats1 NA coding upstream 310275 5801891 ~ 5834662 (+)
btla NA coding upstream 505999 5628989 ~ 5638938 (+)
LOC103047200 sik1,LOC108436788,LOC105908677,LOC103352856,LOC106940689 coding upstream 707705 5423935 ~ 5437232 (+)
LOC103021436 ube2a,ube2al,LOC103021436,LOC103029486,LOC108259060,LOC107552373,LOC105934920,LOC107588833 coding upstream 839828 5300599 ~ 5305109 (+)
LOC103026554 LOC108423842 coding downstream 143581 6289550 ~ 6293768 (+)
tmprss3 tmprss3 coding downstream 150217 6296186 ~ 6307328 (+)
ccdc148 NA coding downstream 482637 6628606 ~ 6733187 (+)
LOC103030586 acvr1 coding downstream 615382 6761351 ~ 6832556 (+)
acvr1c acvr1c,LOC107734493,LOC107657408,LOC107548804,LOC107745259 coding downstream 692417 6838386 ~ 6884350 (+)
LOC111194880 NA non-coding upstream 2528 6137286 ~ 6142409 (+)
G165402 NA non-coding upstream 16814 6127835 ~ 6128123 (+)
LOC111194857 NA non-coding upstream 39181 6103188 ~ 6105756 (+)
G165343 NA non-coding upstream 140836 5998027 ~ 6004101 (+)
G165323 NA non-coding upstream 213786 5872241 ~ 5931151 (+)
LOC103046189 NA non-coding downstream 178 6146147 ~ 6158276 (+)
G165416 NA non-coding downstream 44211 6190180 ~ 6190692 (+)
G165426 NA non-coding downstream 44833 6190802 ~ 6192416 (+)
LOC111188246 NA non-coding downstream 95875 6241844 ~ 6243216 (+)
G165418 NA non-coding downstream 97558 6243527 ~ 6243915 (+)
LOC107196936 NA other upstream 21886 6117364 ~ 6123051 (+)
LOC103021746 LOC108436791,LOC107721608 other upstream 846209 5268039 ~ 5298728 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other upstream 3651946 2490044 ~ 2492991 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other upstream 4306850 1802787 ~ 1838087 (+)
tspear tspear other upstream 4384377 1744406 ~ 1760560 (+)
LOC111194881 NA other downstream 14431 6160400 ~ 6237986 (+)
wdr4 wdr4 other downstream 194026 6339995 ~ 6345403 (+)
LOC103040759 speg,LOC108423902,LOC108266540 other downstream 1239164 7385133 ~ 7485349 (+)
LOC103036674 col18a1,LOC108423906 other downstream 1530817 7676786 ~ 7742228 (+)
LOC111194887 NA other downstream 1883426 8029395 ~ 8034584 (+)

Expression


Co-expression Network