Gene
RNA
| Item | Value |
|---|---|
| gene id | G165494 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 6443000 ~ 6443272 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU224077 | False | 244 | lncRNA | 0.54 | 2 | 6443000 | 6443272 |
| TU224079 | True | 252 | lncRNA | 0.54 | 2 | 6443000 | 6443272 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmprss3 | tmprss3 | coding | upstream | 135672 | 6296186 ~ 6307328 (+) |
| LOC103026554 | LOC108423842 | coding | upstream | 149232 | 6289550 ~ 6293768 (+) |
| nr1i2 | NA | coding | upstream | 580093 | 5835481 ~ 5862907 (+) |
| maats1 | NA | coding | upstream | 608338 | 5801891 ~ 5834662 (+) |
| btla | NA | coding | upstream | 804062 | 5628989 ~ 5638938 (+) |
| ccdc148 | NA | coding | downstream | 185334 | 6628606 ~ 6733187 (+) |
| LOC103030586 | acvr1 | coding | downstream | 318079 | 6761351 ~ 6832556 (+) |
| acvr1c | acvr1c,LOC107734493,LOC107657408,LOC107548804,LOC107745259 | coding | downstream | 395114 | 6838386 ~ 6884350 (+) |
| LOC103026442 | NA | coding | downstream | 453362 | 6896634 ~ 6908752 (+) |
| LOC103041636 | NA | coding | downstream | 469840 | 6913112 ~ 6916257 (+) |
| G165487 | NA | non-coding | upstream | 24751 | 6416344 ~ 6418249 (+) |
| LOC111194884 | NA | non-coding | upstream | 30062 | 6400494 ~ 6412938 (+) |
| G165484 | NA | non-coding | upstream | 54002 | 6388702 ~ 6388998 (+) |
| G165474 | NA | non-coding | upstream | 94349 | 6348003 ~ 6348651 (+) |
| G165469 | NA | non-coding | upstream | 117242 | 6319319 ~ 6325758 (+) |
| G165507 | NA | non-coding | downstream | 27494 | 6470766 ~ 6471725 (+) |
| G165523 | upp2,LOC107699962 | non-coding | downstream | 220975 | 6664247 ~ 6741801 (+) |
| G165534 | NA | non-coding | downstream | 308140 | 6751412 ~ 6751783 (+) |
| G165530 | NA | non-coding | downstream | 442576 | 6885848 ~ 6890770 (+) |
| G165643 | NA | non-coding | downstream | 640729 | 7084001 ~ 7084301 (+) |
| wdr4 | wdr4 | other | upstream | 97597 | 6339995 ~ 6345403 (+) |
| LOC111194881 | NA | other | upstream | 205014 | 6160400 ~ 6237986 (+) |
| G165406 | NA | other | upstream | 297031 | 6144937 ~ 6145969 (+) |
| LOC107196936 | NA | other | upstream | 319949 | 6117364 ~ 6123051 (+) |
| LOC103021746 | LOC108436791,LOC107721608 | other | upstream | 1144272 | 5268039 ~ 5298728 (+) |
| LOC103040759 | speg,LOC108423902,LOC108266540 | other | downstream | 941861 | 7385133 ~ 7485349 (+) |
| LOC103036674 | col18a1,LOC108423906 | other | downstream | 1233514 | 7676786 ~ 7742228 (+) |
| LOC111194887 | NA | other | downstream | 1586123 | 8029395 ~ 8034584 (+) |
| LOC103024476 | igfbp5,igfbp5b,LOC103024476,LOC107656526,LOC107719877,LOC107601375 | other | downstream | 2537290 | 8980562 ~ 9067879 (+) |
| G166015 | NA | other | downstream | 2594970 | 9038242 ~ 9085850 (+) |
