Gene
RNA
| Item | Value |
|---|---|
| gene id | G54957 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 7227451 ~ 7228576 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62525 | False | 926 | lncRNA | 0.43 | 1 | 7227451 | 7228376 |
| TU62526 | False | 662 | lncRNA | 0.43 | 1 | 7227784 | 7228445 |
| TU62527 | True | 475 | lncRNA | 0.36 | 1 | 7228102 | 7228576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_07111833_07115320 | NA | coding | upstream | 112029 | 7110351 ~ 7115443 (+) |
| CI01000009_07101768_07105835 | NA | coding | upstream | 121442 | 7101269 ~ 7106009 (+) |
| CI01000009_07091022_07092696 | NA | coding | upstream | 134650 | 7090918 ~ 7092801 (+) |
| CI01000009_07051811_07054331 | NA | coding | upstream | 172826 | 7050718 ~ 7054625 (+) |
| CI01000009_06975071_07009147 | ARHGAP15 | coding | upstream | 218034 | 6975071 ~ 7009417 (+) |
| CI01000009_07316335_07346664 | ACVR2A, ACVR2AA | coding | downstream | 87759 | 7316335 ~ 7346664 (+) |
| CI01000009_07361747_07377615 | EPC2 | coding | downstream | 133171 | 7361747 ~ 7378451 (+) |
| CI01000009_07392574_07395739 | MED4.S, MED4 | coding | downstream | 163905 | 7392481 ~ 7395770 (+) |
| CI01000009_07440170_07459782 | HTR2A, HTR2AA | coding | downstream | 211463 | 7440039 ~ 7460409 (+) |
| CI01000009_07490344_07493862 | ESTD, ESD | coding | downstream | 261672 | 7490248 ~ 7493862 (+) |
| G54958 | NA | non-coding | upstream | 364 | 7225141 ~ 7227087 (+) |
| G54952 | NA | non-coding | upstream | 15801 | 7211402 ~ 7211650 (+) |
| G54946 | NA | non-coding | upstream | 25524 | 7201690 ~ 7201927 (+) |
| G54779 | NA | non-coding | upstream | 70293 | 7156881 ~ 7157158 (+) |
| G54752 | NA | non-coding | upstream | 106672 | 7120495 ~ 7120779 (+) |
| G54964 | NA | non-coding | downstream | 8731 | 7237307 ~ 7237514 (+) |
| G54992 | NA | non-coding | downstream | 61020 | 7289596 ~ 7289853 (+) |
| G54999 | NA | non-coding | downstream | 67447 | 7296023 ~ 7296275 (+) |
| G55013 | NA | non-coding | downstream | 175499 | 7404075 ~ 7404335 (+) |
| G55009 | NA | non-coding | downstream | 235552 | 7464128 ~ 7464458 (+) |
| G53651 | NA | other | upstream | 979059 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 1294650 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 1688397 | 5522242 ~ 5540638 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 4018467 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 4164864 | 3062033 ~ 3062587 (+) |
| G56100 | NA | other | downstream | 1900724 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 2624783 | 9853929 ~ 9856587 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 4532210 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 4705366 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 5203982 | 12432538 ~ 12436017 (+) |
