G166015


Basic Information

Item Value
gene id G166015
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 9038242 ~ 9085850 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU224842
aaaaaaaagaaatacaagaaATACAAACATTGTTGAAGGTAACatgtttaattgtattgtaATTTAATCCTGTAATAAATGACAATAACTGTACTGCTTTACATGCATTCATGGCTTTTTTTAGTCCCTTTTTTAATTACAGGCAGGCACTTGTTGTATTCACTGACCATTTCTATAAGACGCCacaagcattgtttttttttttttttctttggtggtTAAAAGTAAAGCTTTACTATCAGATGCAGGTGCGCCTCCTGGTACTCAATAACATGCAAAgcgacaaaaagaaaaaaaaggaggagggggagagagTAAGTGCATGAGAAAGACTGACATGGCACATGGTGTTTTGGATTTGCTTAAGAAATTCCCTCTGTGGCCTATGTGAGCCTCGtcaaacacagagagagcagaCCTGACAGTTTTACACTGCAGCAGATGGCAAACACTGCTTTCCTCTGTCCTCAGGCTGCAGGCGTGGCACAGCAACCccctctgcacacacacacacacacacagacacactctcatGCCATCACACTccctcgctcacacacacattcacattctTTCAGCCCTTTAGGACAACTGTGGGAAATCAATATGCCCAAAAACCACAGGGATTGGTTTCGCTTTGTTTTCAAACTAGGCCAGACTCAAAGTACCGTAAAATTTACTGTACCACCGGAGGGCAGGCAGCAATCTATTTCGGAAACCAACCCAAACGGAAAACTCGCAGCCAGTGTCTCAGCATTCACTCTGCTGGCACCAACCCCCCCTGTCCAGTCCGGTTCAGTCCAGTGGGGTGGGGGTTGGGTGGGTGGGGGTTTTAAGAGAGCCGTTCTGTAGCACcataatacacactaaaaaaagaaaatctatgAAAGCTAATTTTAAAGCCGCGCTGGACATGGAAATGCCATGTGAGTTATTGGAGGTTAATATGTTATCTGAGAGGCGAACTCGCAGAGGTCTCAACCGAGCCGAGCTTAGCCGAGTCGAGCCGAGCTGTTGAAGCTGTTCGGTTTTCATACAGAGCTTTTGTGGCCTACGCCGTTGCATTTGTTTACAATCGATCAAGCTTAATCAGCTGCTATTTCTGGATGCAGTCATTTTGAGCTGTTCAATGCTATACGCTcggagagagacaaagacagagagagagagagagagtgagtgtatgtgtgtgtgaatgactGACGGACAACAAGCAAGATCATATTTCACGAGCTAGCTGAGCAAATGTGAGCAGAATTCTCATTAAGCACAATCGCAAGCTCTAATCCCTGCATACCTGCTGAGCACCACTTGTACTAAATAGATCGCACCAGGTGGGAAATCTGCTGACAGGGCAAGCTTAGCACTCGCGCTCAACCTGTGCGCCCCTTGGCTTGCCTTCACACGACTGTATACACCCTCCCCGACAACCACCACGACCACAGCTACCACCAAAAGCCCTCCTCTCTCATGTCCTTCCCCTCCCCCTCCACCCCCCCGAGAGACTGTAGAGTAGCTAGGTAAAGCCTGACCCATCTCTGCATTGCAGGCATACATTCGCAAACCTGCGTTTATTTATAGGCCCTTAACCCACTTAATATCGCATTTGTCAATGTCAGGCCAGTGTCCTAATCTCGACCTCTGTCAGCACGTCATTAGTAACCACTTGTGTGCCCCCTCCACCCTTGCCCATCATACCACTCCACCCCATTTTTCCCCCGCACATAACTGGATGGGGAGAATTGGATGGGATGGGATGAGGTGGTGGAGGCGGAGGGGGGGGTCAAACGTGGGTGGGTGGGGCAGGCAGAGGTCTATCAGCTGCCAAGCTACCAGTGGCTACATCCCCttaacacacacaggcacacacacacacacacacactcatactcatCCACATAAACCACACAAACCGACCCTCTGTGGACACCCTGCAGACAGGAGACAAGGCCTCTCCACTACAGAGAATGCAGCTCCACAGGCTTATGAAGAAGATGGGGAAGGTGGGGTgttatagaaagagaaagagagagagagagagagagagtggggagGCAGCGGTagggaaagaaggaaagatTAATCATAATGAATACAAGTACATAGCACTGATGGTTCATTGTagataatgaagaaaaaaaaagaaaataataaaacgaGTACATAAAGCACCTTGTTCCATCTAGAAATTAGCTTATATGTTAGCCTATACATGTTAGCATAGCATACATACATCCCTTGGTGTTTAGCTGAACATTTAGCGCTTAGCTCAGTTTAGCATATATGAACTAAGCAGTCCCAGCATTTAGTGTACCGTAtttttacggactataaggcgcactgtattaTTACGGGTGAGGTAAGTGGGATGTGTTGGCgggtttattgtaaaaaaaaaacattgtctttcaaagtcaaacaagcgctggatgttaatctaaacagatttctttcctgaaaactgtttattttaaacgTGGCTTGTTTTAACTATGgaaaacatgcaggctacaatGTAGCCAACATAATCACCTCTGTGGCTAGTGGCTAATCCTAATATAATACTGCTCctgccttggtgctggagaaacttcactgaaactcctttataacactgtacttcatcAGAGTGGCTTttacatacataaggtgcaccggattataaggcgcactgttcattgtttttttggaaaattaaaggattttaagtgcgccttatagtgcaaaaaatacagtatgttagcCTGACTTAATGGAGGTGGGAACGTAGCCAAACTCAGTCAGACAGCAGCCCACACTGTGTTACACACTGGGCTCAAAGTTGGCACATATAGGCCCAGTGCTTACTGGGTAATTTACAGTGAACAGGAGGACACAATGCCTGTCTGCCTCTCACTGTCAAATTTAGCATCAATTTATGAGTTATGAAAGAAAGAATGATGGAAATGCAGGAGGGTGGGATACAAATGTGTCCTTGTCTTCTATTTTTTGTCAtgagctgtttttctttttaacatgctttttttgttgtaattgaGATTAGAAATTAAAATCGAAATCAAACTGGGACCGTAAGAttgattttatacacattttatacacGCAAAAATATAAGCATGCACGCCTCTCTCCAGCTTCGTCTCTCATTGTTGTGTAGCTCTGCTTGTTCCCTCCGCGGGTGACAGAGCACGTCTATTTCTGCAGGTCGATGGGGGGCTCCAGCTCTGGCCCGCCGGTGTACTGGCTGCAGTTGGGGTCGCCCCTCACCCGGGCCGAGGAGGGGATCTGGATGCCGGTGTAGGGGTTCACGCACCAGCACTCGCCTCGCTGCCCATGGGTGGACATGTGGCACTGTTTAGATTATAGTGTCCTTTTATGTCACAGTTGGGGAACTTCAGCTCATAGAGGTTCTCCAGGGGTCCCTTGTTGTTGTGGAAGGTCATTTTGGAGATCTCCTCCAGGACTTTATCCAGCTCCTGCTCACACTGACTCtgttcagacacacacacacacacacaCTGTCTGGGCCGAGGTGTCTTAAGATCCTCCACACGGTTGAGCATCATCTTGGACCTCTGCTCATTCTGGTGATGCCTAACAGCAGTCTCCTTCAGCCAGTAGTTAGCATCTTTGGTCGGCTTCTTCAAAAACGGCGATCTTGTCCCAGAGAGGTCTA
>TU224843
GAACAGTCTcttctagtagagtctttggcgtaggccccgtcatcggcccaggacttgatacatctgggctctgcagatcctgtcgtacattggagacaggggcggagccaacccccgtgcaaccaaacgggaccaacctggaggcggtggggaaggaggaggggggagagagTAAGTGCATGAGAAAGACTGACATGGCACATGGTGTTTTGGATTTGCTTAAGAAATTCCCTCTGTGGCCTATGTGAGCCTCGtcaaacacagagagagcagaCCTGACAGTTTTACACTGCAGCAGATGGCAAACACTGCTTTCCTCTGTCCTCAGGCTGCAGGCGTGGCACAGCAACCccctctgcacacacacacacacacacagacacactctcatGCCATCACACTccctcgctcacacacacattcacattctTTCAGCCCTTTAGGACAACTGTGGGAAATCAATATGCCCAAAAACCACAGGGATTGGTTTCGCTTTGTTTTCAAACTAGGCCAGACTCAAAGTACCGTAAAATTTACTGTACCACCGGAGGGCAGGCAGCAATCTATTTCGGAAACCAACCCAAACGGAAAACTCGCAGCCAGTGTCTCAGCATTCACTCTGCTGGCACCAACCCCCCCTGTCCAGTCCGGTTCAGTCCAGTGGGGTGGGGGTTGGGTGGGTGGGGGTTTTAAGAGAGCCGTTCTGTAGCACcataatacacactaaaaaaagaaaatctatgAAAGCTAATTTTAAAGCCGCGCTGGACATGGAAATGCCATGTGAGTTATTGGAGGTTAATATGTTATCTGAGAGGCGAACTCGCAGAGGTCTCAACCGAGCCGAGCTTAGCCGAGTCGAGCCGAGCTGTTGAAGCTGTTCGGTTTTCATACAGAGCTTTTGTGGCCTACGCCGTTGCATTTGTTTACAATCGATCAAGCTTAATCAGCTGCTATTTCTGGATGCAGTCATTTTGAGCTGTTCAATGCTATACGCTcggagagagacaaagacagagagagagagagagagtgagtgtatgtgtgtgtgaatgactGACGGACAACAAGCAAGATCATATTTCACGAGCTAGCTGAGCAAATGTGAGCAGAATTCTCATTAAGCACAATCGCAAGCTCTAATCCCTGCATACCTGCTGAGCACCACTTGTACTAAATAGATCGCACCAGGTGGGAAATCTGCTGACAGGGCAAGCTTAGCACTCGCGCTCAACCTGTGCGCCCCTTGGCTTGCCTTCACACGACTGTATACACCCTCCCCGACAACCACCACGACCACAGCTACCACCAAAAGCCCTCCTCTCTCATGTCCTTCCCCTCCCCCTCCACCCCCCCGAGAGACTGTAGAGTAGCTAGGTAAAGCCTGACCCATCTCTGCATTGCAGGCATACATTCGCAAACCTGCGTTTATTTATAGGCCCTTAACCCACTTAATATCGCATTTGTCAATGTCAGGCCAGTGTCCTAATCTCGACCTCTGTCAGCACGTCATTAGTAACCACTTGTGTGCCCCCTCCACCCTTGCCCATCATACCACTCCACCCCATTTTTCCCCCGCACATAACTGGATGGGGAGAATTGGATGGGATGGGATGAGGTGGTGGAGGCGGAGGGGGGGGTCAAACGTGGGTGGGTGGGGCAGGCAGAGGTCTATCAGCTGCCAAGCTACCAGTGGCTACATCCCCttaacacacacaggcacacacacacacacacacactcatactcatCCACATAAACCACACAAACCGACCCTCTGTGGACACCCTGCAGACAGGAGACAAGGCCTCTCCACTACAGAGAATGCAGCTCCACAGGCTTATGAAGAAGATGGGGAAGGTGGGGTgttatagaaagagaaagagagagagagagagagagagtggggagGCAGCGGTagggaaagaaggaaagatTAATCATAATGAATACAAGTACATAGCACTGATGGTTCATTGTagataatgaagaaaaaaaaagaaaataataaaacgaGTACATAAAGCACCTTGTTCCATCTAGAAATTAGCTTATATGTTAGCCTATACATGTTAGCATAGCATACATACATCCCTTGGTGTTTAGCTGAACATTTAGCGCTTAGCTCAGTTTAGCATATATGAACTAAGCAGTCCCAGCATTTAGTGTACCGTAtttttacggactataaggcgcactgtattaTTACGGGTGAGGTAAGTGGGATGTGTTGGCgggtttattgtaaaaaaaaaacattgtctttcaaagtcaaacaagcgctggatgttaatctaaacagatttctttcctgaaaactgtttattttaaacgTGGCTTGTTTTAACTATGgaaaacatgcaggctacaatGTAGCCAACATAATCACCTCTGTGGCTAGTGGCTAATCCTAATATAATACTGCTCctgccttggtgctggagaaacttcactgaaactcctttataacactgtacttcatcAGAGTGGCTTttacatacataaggtgcaccggattataaggcgcactgttcattgtttttttggaaaattaaaggattttaagtgcgccttatagtgcaaaaaatacagtatgttagcCTGACTTAATGGAGGTGGGAACGTAGCCAAACTCAGTCAGACAGCAGCCCACACTGTGTTACACACTGGGCTCAAAGTTGGCACATATAGGCCCAGTGCTTACTGGGTAATTTACAGTGAACAGGAGGACACAATGCCTGTCTGCCTCTCACTGTCAAATTTAGCATCAATTTATGAGTTATGAAAGAAAGAATGATGGAAATGCAGGAGGGTGGGATACAAATGTGTCCTTGTCTTCTATTTTTTGTCAtgagctgtttttctttttaacatgctttttttgttgtaattgaGATTAGAAATTAAAATCGAAATCAAACTGGGACCGTAAGAttgattttatacacattttatacacGCAAAAATATAAGCATGCACGCCTCTCTCCAGCTTCGTCTCTCATTGTTGTGTAGCTCTGCTTGTTCCCTCCGCGGGTGACAGAGCACGTCTATTTCTGCAGGTCGATGGGGGGCTCCAGCTCTGGCCCGCCGGTGTACTGGCTGCAGTTGGGGTCGCCCCTCACCCGGGCCGAGGAGGGGATCTGGATGCCGGTGTAGGGGTTCACGCACCAGCACTCGCCTCGCTGCCCATGGGTGGACATGTGGCACTGGAACAcaagagggaggtagagagagtgggGGAA

Function

GO:

id name namespace
GO:0008236 serine-type peptidase activity molecular_function
GO:0017171 serine hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224842 True 3676 TUCP 0.46 4 9075320 9085850
TU224843 False 3244 TUCP 0.48 3 9038242 9078728

Neighbor

gene id symbol gene type direction distance location
LOC103023018 tns1 coding upstream 380485 8298725 ~ 8657757 (+)
LOC103039517 NA coding upstream 894987 8135058 ~ 8143255 (+)
LOC103033948 march4,LOC105020038 coding upstream 928550 8083359 ~ 8109692 (+)
LOC103039823 LOC108423915 coding upstream 970357 8049095 ~ 8067885 (+)
LOC103036074 LOC103036074,LOC108423860,LOC107660577,LOC108266225,LOC107714364,LOC107728914,LOC107714365,LOC107602160,LOC107584166 coding upstream 1121025 7910008 ~ 7917217 (+)
LOC103025110 cx43.4,LOC108423927,LOC107741582,LOC107704825 coding downstream 237486 9323336 ~ 9331783 (+)
lct NA coding downstream 248426 9334276 ~ 9366222 (+)
hdac4 hdac4,LOC107601379,LOC107741589 coding downstream 337213 9423063 ~ 9661794 (+)
LOC103027237 LOC108423930 coding downstream 684766 9770616 ~ 9776408 (+)
LOC103028506 NA coding downstream 1183196 10269046 ~ 10280259 (+)
G166003 NA non-coding upstream 234797 8803183 ~ 8803445 (+)
G165958 NA non-coding upstream 561729 8475634 ~ 8476513 (+)
G165942 NA non-coding upstream 600890 8340549 ~ 8437352 (+)
G165953 NA non-coding upstream 617366 8419783 ~ 8420876 (+)
G165885 NA non-coding upstream 795954 8240906 ~ 8242288 (+)
G166073 NA non-coding downstream 198878 9284728 ~ 9285052 (+)
G166077 NA non-coding downstream 202122 9287972 ~ 9288253 (+)
G166078 NA non-coding downstream 202559 9288409 ~ 9288670 (+)
G166086 NA non-coding downstream 263509 9349359 ~ 9350193 (+)
G166088 NA non-coding downstream 281826 9367676 ~ 9370095 (+)
LOC111194887 NA other upstream 1003658 8029395 ~ 8034584 (+)
LOC103036674 col18a1,LOC108423906 other upstream 1296014 7676786 ~ 7742228 (+)
LOC103040759 speg,LOC108423902,LOC108266540 other upstream 1552893 7385133 ~ 7485349 (+)
wdr4 wdr4 other upstream 2692839 6339995 ~ 6345403 (+)
LOC111194881 NA other upstream 2800256 6160400 ~ 6237986 (+)
LOC103024790 LOC103024790 other downstream 50769 9136619 ~ 9148577 (+)
G166177 adarb1,adarb1b,LOC108266805,LOC105907970 other downstream 742093 9827943 ~ 9837292 (+)
G166294 NA other downstream 1341416 10427266 ~ 10429912 (+)
heg1 heg1,LOC107555935,LOC107741920,LOC107714104 other downstream 1534837 10620687 ~ 10636811 (+)
tas2r1 NA other downstream 1588381 10674231 ~ 10679019 (+)

Expression


Co-expression Network