Gene
RNA
| Item | Value |
|---|---|
| gene id | G55214 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 7396927 ~ 7397126 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: hepatocyte nuclear factor 1-alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62791 | True | 200 | lncRNA | 0.31 | 1 | 7396927 | 7397126 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_07383927_07391805 | ITM2B | coding | downstream | 4933 | 7383654 ~ 7391994 (-) |
| CI01000009_07224625_07229839 | NA | coding | downstream | 166276 | 7224316 ~ 7230651 (-) |
| CI01000009_07064060_07084764 | ZEB2A | coding | downstream | 311709 | 7063797 ~ 7085218 (-) |
| CI01000009_07020336_07047155 | NA | coding | downstream | 348750 | 7020315 ~ 7048177 (-) |
| CI01000009_06913437_06917631 | NA | coding | downstream | 479296 | 6912470 ~ 6917631 (-) |
| CI01000009_07500752_07541007 | LRCH1 | coding | upstream | 103476 | 7500602 ~ 7541007 (-) |
| CI01000009_07625693_07637462 | SLC39A10 | coding | upstream | 228428 | 7625554 ~ 7637462 (-) |
| CI01000009_07953250_07953748 | NA | coding | upstream | 555592 | 7952718 ~ 7954139 (-) |
| CI01000009_08050911_08053397 | NA | coding | upstream | 653295 | 8050421 ~ 8053500 (-) |
| CI01000009_08058976_08066474 | STK17B | coding | upstream | 661498 | 8058624 ~ 8066778 (-) |
| G55178 | NA | non-coding | downstream | 126209 | 7269778 ~ 7270718 (-) |
| G55171 | NA | non-coding | downstream | 137213 | 7259486 ~ 7259714 (-) |
| G55156 | NA | non-coding | downstream | 165565 | 7231109 ~ 7231362 (-) |
| G55151 | NA | non-coding | downstream | 174404 | 7222308 ~ 7222523 (-) |
| G55215 | NA | non-coding | upstream | 84 | 7397210 ~ 7397409 (-) |
| G55218 | NA | non-coding | upstream | 26241 | 7423367 ~ 7423595 (-) |
| G55219 | NA | non-coding | upstream | 40529 | 7437655 ~ 7437983 (-) |
| G55238 | NA | non-coding | upstream | 89942 | 7487068 ~ 7487290 (-) |
| G55249 | NA | non-coding | upstream | 144719 | 7541845 ~ 7542076 (-) |
| G53515 | NA | other | downstream | 1891679 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 3165458 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 4134970 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 4497520 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 4834394 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 1028695 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 1461026 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 4891091 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 6578262 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 6636438 | 14033564 ~ 14037873 (-) |
