Gene
RNA
| Item | Value |
|---|---|
| gene id | G55009 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 7464128 ~ 7464458 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62583 | True | 331 | lncRNA | 0.37 | 1 | 7464128 | 7464458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_07440170_07459782 | HTR2A, HTR2AA | coding | upstream | 3719 | 7440039 ~ 7460409 (+) |
| CI01000009_07392574_07395739 | MED4.S, MED4 | coding | upstream | 68358 | 7392481 ~ 7395770 (+) |
| CI01000009_07361747_07377615 | EPC2 | coding | upstream | 85677 | 7361747 ~ 7378451 (+) |
| CI01000009_07316335_07346664 | ACVR2A, ACVR2AA | coding | upstream | 117464 | 7316335 ~ 7346664 (+) |
| CI01000009_07111833_07115320 | NA | coding | upstream | 348706 | 7110351 ~ 7115443 (+) |
| CI01000009_07490344_07493862 | ESTD, ESD | coding | downstream | 25790 | 7490248 ~ 7493862 (+) |
| CI01000009_07543034_07544161 | NA | coding | downstream | 78576 | 7543034 ~ 7544161 (+) |
| CI01000009_07545007_07550103 | NA | coding | downstream | 80549 | 7545007 ~ 7550729 (+) |
| CI01000009_07555667_07623149 | DNAH7 | coding | downstream | 91209 | 7555667 ~ 7623918 (+) |
| CI01000009_07969738_07973990 | NA | coding | downstream | 504686 | 7969144 ~ 7974033 (+) |
| G55013 | NA | non-coding | upstream | 59793 | 7404075 ~ 7404335 (+) |
| G54999 | NA | non-coding | upstream | 167853 | 7296023 ~ 7296275 (+) |
| G54992 | NA | non-coding | upstream | 174275 | 7289596 ~ 7289853 (+) |
| G54964 | NA | non-coding | upstream | 226614 | 7237307 ~ 7237514 (+) |
| G54957 | NA | non-coding | upstream | 235552 | 7227451 ~ 7228576 (+) |
| G55030 | NA | non-coding | downstream | 19760 | 7484218 ~ 7484503 (+) |
| G55032 | NA | non-coding | downstream | 22355 | 7486813 ~ 7487030 (+) |
| G55057 | NA | non-coding | downstream | 87414 | 7551872 ~ 7552121 (+) |
| G55058 | NA | non-coding | downstream | 97091 | 7561549 ~ 7561817 (+) |
| G55091 | NA | non-coding | downstream | 188461 | 7652919 ~ 7653350 (+) |
| G53651 | NA | other | upstream | 1215736 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 1531327 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 1925074 | 5522242 ~ 5540638 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 4255144 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 4401541 | 3062033 ~ 3062587 (+) |
| G56100 | NA | other | downstream | 1664842 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 2388901 | 9853929 ~ 9856587 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 4296328 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 4469484 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 4968100 | 12432538 ~ 12436017 (+) |
