Gene
RNA
| Item | Value |
|---|---|
| gene id | G55030 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 7484218 ~ 7484503 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62604 | True | 286 | lncRNA | 0.41 | 1 | 7484218 | 7484503 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_07440170_07459782 | HTR2A, HTR2AA | coding | upstream | 23809 | 7440039 ~ 7460409 (+) |
| CI01000009_07392574_07395739 | MED4.S, MED4 | coding | upstream | 88448 | 7392481 ~ 7395770 (+) |
| CI01000009_07361747_07377615 | EPC2 | coding | upstream | 105767 | 7361747 ~ 7378451 (+) |
| CI01000009_07316335_07346664 | ACVR2A, ACVR2AA | coding | upstream | 137554 | 7316335 ~ 7346664 (+) |
| CI01000009_07111833_07115320 | NA | coding | upstream | 368796 | 7110351 ~ 7115443 (+) |
| CI01000009_07490344_07493862 | ESTD, ESD | coding | downstream | 5745 | 7490248 ~ 7493862 (+) |
| CI01000009_07543034_07544161 | NA | coding | downstream | 58531 | 7543034 ~ 7544161 (+) |
| CI01000009_07545007_07550103 | NA | coding | downstream | 60504 | 7545007 ~ 7550729 (+) |
| CI01000009_07555667_07623149 | DNAH7 | coding | downstream | 71164 | 7555667 ~ 7623918 (+) |
| CI01000009_07969738_07973990 | NA | coding | downstream | 484641 | 7969144 ~ 7974033 (+) |
| G55009 | NA | non-coding | upstream | 19760 | 7464128 ~ 7464458 (+) |
| G55013 | NA | non-coding | upstream | 79883 | 7404075 ~ 7404335 (+) |
| G54999 | NA | non-coding | upstream | 187943 | 7296023 ~ 7296275 (+) |
| G54992 | NA | non-coding | upstream | 194365 | 7289596 ~ 7289853 (+) |
| G54964 | NA | non-coding | upstream | 246704 | 7237307 ~ 7237514 (+) |
| G55032 | NA | non-coding | downstream | 2310 | 7486813 ~ 7487030 (+) |
| G55057 | NA | non-coding | downstream | 67369 | 7551872 ~ 7552121 (+) |
| G55058 | NA | non-coding | downstream | 77046 | 7561549 ~ 7561817 (+) |
| G55091 | NA | non-coding | downstream | 168416 | 7652919 ~ 7653350 (+) |
| G55328 | NA | non-coding | downstream | 240073 | 7724576 ~ 7724812 (+) |
| G53651 | NA | other | upstream | 1235826 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 1551417 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 1945164 | 5522242 ~ 5540638 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 4275234 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 4421631 | 3062033 ~ 3062587 (+) |
| G56100 | NA | other | downstream | 1644797 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 2368856 | 9853929 ~ 9856587 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 4276283 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 4449439 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 4948055 | 12432538 ~ 12436017 (+) |
