G55814



Basic Information


Item Value
gene id G55814
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 8425821 ~ 8428012 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU63500
TTCTTGTACGCTGTCTCAATGCTCTTCAGGTAGCTTAAAGGAACATTCTGGAGGTATGGCTTTCCTGATGCCTTGAGATTCTTTTGGACCTCTTCAGCAGGTAAGTCGACATAGATGACCAAATGAGGGGGCAGAAACTCACAGATACTTATATTCTTAACCTCATTATAGTGTTCCACACACTGCTTGCGGATGAAGCCTTCTTTGAACATGGCCTCCAAAAAAACCATGTCACTAAATGGCGATCGTTCCAGAATAACTCCCTGTCCTGTAGAGAGCAGGTGCTCAATAGCATCAGAGTACTGCAGCAGCCTCATCAGGTACATCCAAGACTGCAGGCGGTAAGAGTTACCGTCACTGGCTTTGGGCTCCAAGTAGAACTTCTCCAGACTGCAGTTTCCATTAAAAGCCTGATCTAGAGGAACTTTCTCATTTGTCATTTTGTCAACATAGTGCGTGTCTGGCTCTGGCATGTACAGCATTCCTAATGAGAGAAACATCGAATACTGAACAAATAGTTCTAGGAATAGTAAAATATTCAGTGGGGTTAAGATCAGGACTCTGTGGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU63500 True 569 TUCP 0.44 5 8425821 8428012

Neighbor


gene id symbol gene type direction distance location
CI01000009_08419132_08424961 FAIM, FAIMA, FAIM.L coding downstream 609 8418976 ~ 8425212 (-)
CI01000009_08389932_08402359 NA coding downstream 22799 8389633 ~ 8403022 (-)
CI01000009_08363231_08372375 DHRS12 coding downstream 53383 8363171 ~ 8372438 (-)
CI01000009_08337497_08351090 INTS6 coding downstream 73751 8337018 ~ 8352070 (-)
CI01000009_08299725_08300042 NA coding downstream 124872 8299184 ~ 8300949 (-)
CI01000009_08444920_08447297 GYPC coding upstream 15585 8443597 ~ 8447297 (-)
CI01000009_08495464_08536041 CNTNAP5A, CNTNAP5 coding upstream 67188 8495200 ~ 8537119 (-)
CI01000009_08545736_08549056 NA coding upstream 117544 8545556 ~ 8549056 (-)
CI01000009_08683782_08694491 NA coding upstream 255668 8683680 ~ 8695421 (-)
CI01000009_08700152_08716708 NA coding upstream 272108 8700120 ~ 8717074 (-)
G55821 NA non-coding downstream 12031 8406853 ~ 8413790 (-)
G55886 NA non-coding downstream 38524 8378087 ~ 8387297 (-)
G55872 NA non-coding downstream 130778 8294751 ~ 8295043 (-)
G55868 NA non-coding downstream 147664 8277543 ~ 8278157 (-)
G55890 NA non-coding upstream 2936 8430948 ~ 8431162 (-)
G55891 NA non-coding upstream 4237 8432249 ~ 8432582 (-)
G55905 NA non-coding upstream 44225 8472237 ~ 8472724 (-)
G55919 NA non-coding upstream 164915 8592927 ~ 8593301 (-)
G55948 NA non-coding upstream 168842 8596854 ~ 8597112 (-)
G53515 NA other downstream 2920573 5502395 ~ 5505248 (-)
G52828 NA other downstream 4194352 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 5163864 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 5526414 2883688 ~ 2893975 (-)
G52410 NA other downstream 5863288 2551724 ~ 2562533 (-)
CI01000009_08858198_08860555 NA other upstream 430140 8856310 ~ 8860563 (-)
G59097 NA other upstream 3860205 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 5547376 13975099 ~ 13978614 (-)
G59490 NA other upstream 5605552 14033564 ~ 14037873 (-)
G59811 NA other upstream 6434385 14862397 ~ 14887464 (-)

Expression



Co-expression Network