znf804a (znf804a)


Basic Information

Item Value
gene id znf804a
gene name znf804a
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 2093349 ~ 2191914 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007233764.3
CAGCGGCGCTGCGCGTGCACACGGAGCGCGAGCTCTCTATTGGCTGAGCGGAGCGGAGCGCCCGGCTCTAacacagcagaagcagcagcatgcGCCCcgcacacacgcgcgcgcacaccGCACAGCACCCCGCACAGCAGCCCGCGCGCGGTGGAGACAACACGCACACCGCggagcgcagcagcagcagcagcgcgcaCTGAGCGGCGCGCGGACCGTAGCGGCACGCGACTGTGCGCGACAGAACATTAAAGGAGGATCTGGGAGTAAAGGCGCGCGAGGCGAGGCTCGATTCGACTTGGCTCTGTTCGGTTCGGATACGCGCAGGGCGCGCGCTCACACCCTCGCCCACGAGCTGAGAACACAAACTGGACTTCTGCTCGTGAGTGCTGGAaactgtttgtgagtgtgtgtgtgtgagagagagagtgtgtgtgtgtgtgtgtgagagacatcTCGACAATCACTCTTAATCCagatgtgctaaaaaaaaaaatcacgttGCATGCAATTCgattaaaatacacacacatctgtggtgtccaaatactttgACACTCTTGCAACAACAACACTTGAGATATTGAGATAAAACTgtgctaaaactaaaaacacctTACAGACAAAGTGTTTCCATGCAGCCGCACTCGTCTACAACTTCTGTGTTGTAGTTGCAAAGTGTCCAAATACTTATGaaaaaaaatttgatttgaGTCACACCTATGACACATGATTTAAAGTTACACTTATAAAACAAGTCAAGCTGAGCGAAGTCTATCACTAGCTGTGTTAAACTAGAAGTCGTTGgtgtccaattacttttggTATCATATGACAACTAATGCCAAAAGTTGCGACAATATTGAACTGGAACATAGTGTGTTTAAAAGTGTCCAAATTCTTTTAACACACAATTTTACTCACATTTACGACACAACATATGCTAAAATGTAGAGCTACATTTATATAACACaaacaatgtaatgtaaagtttgtCACTACTTACAAAGTCACATTTGTGTTAAAGTAGAAGTGTCAGAagtgtccaaatatttttggtATCATATGACAACATGCCCTAAGAGTTGCGACAATATTAGAACTAAAAgtaagtgtgttaaaaaaaaaaaaactctcacaCTGACTTGTTGTTTTTGAGCAACACACATCACTTTTGTGTTGTAGCTGCAaagtgtccaaatacttttgacaTAAGATGTGCTAAAACTtctaaaaaaggttaaaaggacaaaaaaaaaatcagaaattagaaaaaagtgtttggttTAGGCACATAGCTTTTTCACATTTGGGCTTACTTGACACTCGATAAACACTTTGTTTTGTCCGAATACTTTTGTTATATTAGTTTTTAGCTCATTTAAAACATGCgtgttattttctgtttattgcaATTGAACTAAAAGCACTAATTTGTGCTTTGATAGAAATTGtgcttaaaaacacaaacagtgcACATCACTTTGTGTCAGTTTGTGTAGCTGCACATCACTTTCGCACTTTTACATTTGCACAACATACACACGTGTCTAAATACTTTCGGCACATGCACAAAAAATCGTGCAAGCTTCTTTAACACGgataatgcattaatgcatttacGCATTGCGCATTCTAAAAGTGTGTTCTAATCACACTCTTAAAACAACGGAAAATTGCTGAGcatgttctttattattattttttgtgtctgaatacttttggcTTGTCAAAATTGTCTTCTCTGTTAACACAGATGatgcatttaaatacattttaattgcaCTGTAATCTGAGCAGCAcctctatatttatatttctaattatataaatataaaaacatataaacacaggGTTATAATGCGATTAGCTGGATGGCTGTGATTAAAGGACGCACTCTGCTCTGTACTACAACACTGCTAGGTGTGCTGCTTACCCGCACATCAGATCTGAGAGTgcgcgagagtgtgtgagagtgtatatGCGCGCgagagagcgagtgtgtgtgcatgggttTCCACATGGCGTGCTACTACATCGTCATCAGCTCCACACACCTCAGCAACGGACACTTCCGCAACATCAAGGGAGTCTTCAGAGGACCGCTGTGCAGCAAGAGCCTGGATTATGCTGAGAAGGAGAAAACCTTGGCCAAAGCCCTGGAGGACCTGAAGGCCAACTTCTATTGTCAGCTGTGCGACAAGCAGTACTACAAACACCAGGAATTCGACAACCACATCAACTCTTACGACCACGCGCACAAGCAGaGGCTGAAGGAGCTGAAGCAGAGGGAGTTTGCTCGTAACGTGGCCTCCAAGTCCCGTAAAGATGAGCGGAAGCAGGAGAGAGCTCTGCGAAGACTGCATGAACTGGCGGAGCAGCGCCGAGAAGTTCAGTGCGCCCCAGGGAGCGGCCCTATGTTCAAATCCACCACGGTAGCAGTGGAAGGCAGCTTCAGGGATCCGCAGGAGGAGAACCAGAGCACCGGAGGGCTGGAACCTGGAGCCCAGAACCAGCTGAACGGCTGCAAGCAGACCACGTGGGCATACGGCGGAAAAACGGCCAAGAAGCAAGCGCTCAGACGCAAAATAGCCTTCTCCTTTTCCTTCCCGAAGAAAGCTTCAGTGAAGCTGGAGTCTTCGGCCGCAGTTTTCTGTGAGGCTCTGGAGGAGGGAACGGTGGAGCGAAGCAGCAGGACACAGGTTCCATTTGTGGAGCTTGACCTACCTGACTCGCCAGGTGAGGAAAAACAGGCGAACTGCAAGGAAACACTTTGTTGCGATGCAGAAAGCAGTAATGTGGGCAATCAGGAATCTCCAGAAAGGCCTGCTGGAGTGGACGGGCTGGGGCATGTTTCTTCAGATTTGTGCGCGTTCCTCGTTTACTCTGAGGACACGAGCATGTCTCCTGTTTCCAATTCAGACTTACCCAGTAACTCTGAAACTGCTGTGGACTCTGAGAACCACGTGGAGTGCGCTGTGGCTGAGCAAAAAGAAGTCAGCAGTCAGGATGAGACTTGCGGCGACAGCAAAGAGATGGCATTGTCTGTGAGTGACCCCCCAGTAAAGACCTCCTCTGAGGTGCCACCTGAGCACGATTCCTTTCAAAGCGAAGGAAAAGAAGCAGATGCGGCTGCTGCAAAACCCCCTAGCCATTTCTCCAAGCCTAGTCAGCCTTTTTTCTCTGTCCTTGGCAGGGACGGTAAAACCATCTTTCAGTGGCCTTCCGAGATGGTTTCCTTTACCAGAACGGAGCCTTCCTTGTCTTTCAGTTGCAATCCGCTTCTTTTCGACTTCAGGGCTTCACAGATCAGAAGGTGCCCTGATGCGCAGGAGGCAACTGAACCCAAAATTGATGAGGAGTCCTGTTCCAGCAGCTCAGCCAACAGTGCACAGAAATCCTCCTGCTTGGAAAGACACACAGAGGAGGCCTCATGTGGCCACGGGGCAGAGAGCAAGGTCAGAAAGTGCCATCAGTATTCAAGTGATACGGAAGGCAGTGTACGACCCAAAGTGCACAGCAGATGCAGGCATACCAAAGATTGGCCTCACGCCGGCAAGAGAGCGGAGGACAAATTGCGGGCTAGAGATCGGCGCCATTACAGGAGCCAGCACAAAAAGAGACACAAACGGCATCAcaagagaagaaggaggagggaggaggaggatgacgaAGAGGAGCAGAATGAGAGCGCCGTGGAGAAATGCGCAAAATCCCACAGACGAGCAGAGAGCCGGGAAGAGCTTGATAGCCAATTTAGAGGCGCCACTTCACAGCAAGCGCAGCCATTAGAGAAGTCAAAGCAATCAGCTCAAAATCAGGCAGAGAACAACAGCATCGCTCCTGCCGAGCAGAGGGAGGAGGCGGGCAGGATAAACGGCTCCACGGGAGGCTCTGATGAACCTTGGGCCTGCAGTGAAAAGGTGCTGGGAAACTGCAGCGGGACGGCAGGGGAGGCAGGCATAACAGGACACGGCTCAAGCTGCCTCAACACACCTCCCTCTGAGAGAGAAGCCTCAGATCACAGCAGCCTGGGGCTAGAAGCTCCAGACTCTGCAGAGAGGGACGTGGAGGATCTGCACAAAGGAAAGATGCCAAAGAAACGACACAGCAACTCAACCAGCGAGGACGAGGAAGAGACCTGTTCGGATCTGACGCAGTGCATTTGCTGCAGACCCATGAAAGAAGACAACAGTGTTGAAGAAGGCTTTAATATGCTTTGCCCAAAACACGCAAGAAAAAGGCAAAAGCTGGCGCAAATCTGTCCCCAGCCTTCTCACCCTGCAAACGAACATCCTGTTGCTGAAAGCACTGCTCCGAATATGAAGGGCCAGGCCTCCGTGGTGGAGTCAGCGGTGAAtgatttaaaagcagtgtgtgacaGCTCCAATGGGCCAGACCAAATCTCATGCAGTATTGATGACTTAGAGAGTGGTGCGGTTGATTGTCAGATACTGACTTCCATTAGCGGTGCCCCAGGTCAAACAGCCGTGGATAACAGCTGCTGCCAGCCGAACTCAAACCCTTCCCCCACTCAGATCAATGCTCAGAGCGGAAAGGGCACTCATCCCCTACCTGCGGGAGACTCTGGACCTGCAGAGATCCTGACAAGCACAAAGGAGCTCGCTAAGATCCTGTCTAGAGCGGAGCAGGGCTCCGTAAAGGATTGTAAAACGTGTGCCGCGGCAGCTCAAGTTTGCCTGCTGGATGTGAGAGAGATCTTCCCGAGGAAGCCGGAGAAAATCAGTCACGATAAATCGTGTCAGCACAGCCCACAGCCTCTGCAGCCACCGAGGTTTCACCTACCGGAGAACGAACAGCTCACCCTGAAGGGCCTGCTGGATGTGAGAGAAATTGGCCTGCGAAAAGTAGCGAAAGAAAAAGTCAGTCATGATAAATCATGTCAGCACAGCCCacagatgcagagatttcaccTTCCGGAAGAGGAGGGCTTGTGCCTCGGCAGAAACCAGTTCCACGCTGCTCATTGTTTCCAGGCCCACACAGAAAGTATGGAAAGACACTGCATCCTACAGGCCCATGCCCACAGACAGGTTTTACACCAGCAGGTGTTTCCCACCAAGCTAAAACCAGTCTTGCCAAGAGGTTCACTCCAAGTCTCCAGTCCCATCCTGCACCCGGTCCACATGTCCTCGACGGTGCCCTCAGGATCCATCACAATCCGCCACACCATCCTTCAGCACCACGCCACTTTCCTTCCGCCGCAGCCTCCCCCGATCTTCCCTCAGGTAGTTCCAATGACTCGCCTCCCTCTTCCACCGGAAATCTGCCCACCTGCTGCCACGCCTGCCTTCGTCACACCTTCCCAGGTGTCTGTGGTGGGTCCGCCCACTCTCCACCCAGCGGCTGTGACGTTTCATGCCCTTCCGCGTCCGACCCCGGTCTTTCCACCGATCCTACATCGCCCCGCGGCGTTTACGTCCGTTTTGCAACCCCACCCTGCTGTCATCTCCCTGCAGCCTCTCTTCTAGATGCACGAACAGAACATGAACACTATCGGTTCCCTTATGAACAGAAATTAAAAGCAACAgggacaaaaacaaaaacagattgCAAAGGGTTTCCCAGCAAGGGATTAAGCTTTTTCACCAGCtatattttttccttctttccctTCCTTGGAAAAACCCAGTGTAttccaggactaggcttaatccctgtctgggaaaccagCCCAGagaaaagttaataaaaagaaatttcCAGAGCGAAAACTTGGAGAACTCTAGAAGATTTCTAGAAGTACTAGAAATAACCACAAGCGAAGTTATTCATTCTATCATTATCAtatgtctgtttgtttttcattccCTGCATCATTTCTAATCCCACAAAGCAATGTACCAGTCCAACATTACAGTGCTTGAAGGCTTCTGACATTAACGAGGAAAACAGGCAACAAACAAGTGGACTGTTTGTACCTTAGGGGGTAAAAAATAgctctgttttcatttttttgttgttgtgttttacCAAATGTGTTTCACAGATAAGACGTCACAGCCATTGGGGTTTCCTTTTATCAAAATAAATGAGCAAATCCCTGTTTTAATCTGTCAGGTAGACGAGCAACTAATCCaaaaggatttatatttaaccTTGAGCCATGACTCTGCATCAGAAAAGACGAGGAGTGTCTGGTGTTCTGGTGTTGGAGCGTTttgagtgtttagtgtttagtggaTTTAGCGAGCAGAATTGGCATTTAAATGCTGTTGTACACCACGTTTCAGAGATTTCTCACTGTAAAAGGGTTGCACCTCTCTCTCTGCGGCATCGCTGTGGAGTTTAATGCCCACCCACAgctctttttgttttgtgttctcATGTACAGTTTGCTCATCATGCGACAAAGCTCGAAATTAGCTCAGTGATCATGGCAACCACCAGGTATTCTGGGCTGcaggtgtgcgtgtgtgtaggATTAAGCTGTAGCAGTGACAAAGCAGCCGTTTCAGTGTTTGTTTAATGCGATTTAGAGGCTCATGTTAAAACAGCGAATGCAAAAATGCATGTTgccttttttccctttctctcttttttttgggtgaaatcgTTTTGACGACGCTAGCGCAGACCCCAGCGCAGCAGATGCTCAGCGAGGCAGATCCTGTTTGGTCTCCAGTGTGTGCTTAATGCAGCCTGATGCATATTTAACTAACACTGACCTCAGCTGCAGCTCGTTGGGTTTCGTATGAAAGCAAGCACGGACGTGACGAAGCGTGAAAAAACACAAGTGACCGTTGCCTCCTGTTTCTCGCTTTGGCTCGGATTTTGAAGACTTTCTGTTGGGCTGTTGGAAATCAGGACATCAGATTGGAAAGCGTATGGATTCATTCAGACATggcaaattaaaaataacagaattCTATGGATATTACAATTACTGTCGCCATTGCTTTAATGCTGTAACATGGCATATCTAGTACAATATAACAATTAGGCTTCATTTCTTTTGTTCTGCATCAGTACAACACTTTAATGTTGCAATTAAATCCAGCAGTCAGTTGCACCAGCTGAGCATAAACCAGAACATagcttaaacattaaacatgaaACATGAATTGCACTTACCATTGAGTTTGGGTGCTACTAAATTAGTGATCCCCCACAGCGCCCCCCCCCCATACTGTGGCAATCGTAAatgcaaaggtgtgaaaagttgTTGAGTTGTATAAGCATGCTGCATATGACACTCTTCCTCAAACCCCATTGTCTACAGTggctaagaaaataaaatactcaGAAATAAACAAGTTTAAACGAGATTTAAATCGGATCTtcggttgattctgcgtttttcagagaccttaaatatacactaggaaAGCagggtttgacaaggtagcatgATTTGACAGAAACAAGGGTAGGcagcaggtaggcgttctctgttgtagtgctgttagccaatcagaagcgatatgtttgcatgtatgaatattcatgagcattCATTGGCATTCATTCagactagagaccacaactagacattttaaaatatatgcaaaaaacgatggaatgagacctaaaaagtaaaaaaagttaaaagtactggtttgtgtaaaaaaataaaatactacgTGTAAAAAATactactatatacagtattactatTATACAGTAGCACCCAACCCTACTTTATACCCTAACCTCAGATCAGATTAAAGTTCAGCTGGTGAAACTGATTGCAGAACAGCATCCCTTTAAAATAAGCCAAATTTTATTGAAGCATTAGCGGCTGCGCTGTTTCTGAATGAATTATACTCTATGATTTATATCTCTGGGGCTGAATATTAGCCCTCCCAGCTTCAGAATGAGCCCACTGATGCAGTACAACCAAACGACGCAGGCGAATGATCTGCCGTCGCTCTGTATCGTCCGCCTCGTATCACGAATATTTACGTACTGTGCAGCGCTGTAATAATAACCGCTGGGATATGAAAGATAAGAgcacatgtttttcttcttttttttcctctatcgCATATTGCATTAATGGATCATGTTTCTCCGTCTTGCATCAGATCCAAAATATTTCTGATTCCTTCGCTCGCCCAGGCCGCGGGAACATTCAGAAGAGTTAGCCGAGgagtttaaccccttaaaacaTGAGATACTAATGATTACGTTATCAATCGTTCAGCGAGAAAAACTGCTGTATAGTTTTACTATACTGTTCAGTTCAAAGATTGGCATCGTGGCATGCCACAGGGTTCTATATTAGGCcctataaaaattatatattaaaattaatgtgtattttcgaAATTTGGTGGAAGCTTTACTACTAATACAAGATACAGTAGGTCTTTAGTTagattcggtaacactttctgtgTATGTGATGTTTataagacattttaaacatattcagaatgtgttataatgcatttataaagttatatatacaaacatggttataatatGTGTATCACATAATATATTCATGTTTGTTATCCATGACAAATTGTGACCATATTTTTTTGCTACaccaataaaagtaaaagtactggtttgtataaaaaataaaggtaacactttctgtaaatgtca

Function

symbol description
znf804a Predicted to enable metal ion binding activity. Predicted to be active in nucleus. Orthologous to human ZNF804A (zinc finger protein 804A).

NR:

description
uncharacterized protein LOC110502188, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007233764.3 True 8577 mRNA 0.46 4 2093349 2191914

Neighbor

gene id symbol gene type direction distance location
LOC111194854 NA coding upstream 210656 1880148 ~ 1882693 (+)
nup35 nup35,LOC106582498,LOC107749876 coding upstream 214494 1870486 ~ 1878855 (+)
ehhadh NA coding upstream 271129 1806395 ~ 1822220 (+)
LOC103028997 NA coding upstream 296602 1783878 ~ 1796747 (+)
LOC103029311 NA coding upstream 310308 1775451 ~ 1783041 (+)
LOC103024889 nxph2,LOC108413064 coding downstream 248742 2440656 ~ 2473897 (+)
kansl1l NA coding downstream 412144 2604058 ~ 2655714 (+)
map2 map2 coding downstream 468541 2660455 ~ 2875066 (+)
cps1 cps1 coding downstream 720093 2912007 ~ 3011890 (+)
LOC103033219 NA coding downstream 1848072 4039986 ~ 4043593 (+)
G164404 NA non-coding upstream 186476 1903066 ~ 1906873 (+)
G164400 NA non-coding upstream 216264 1876444 ~ 1877085 (+)
G164376 NA non-coding upstream 384708 1706881 ~ 1708641 (+)
G164284 NA non-coding upstream 1103836 989297 ~ 989513 (+)
G164282 NA non-coding upstream 1140920 952065 ~ 952429 (+)
G164467 NA non-coding downstream 901 2192815 ~ 2193188 (+)
G164498 NA non-coding downstream 35632 2227546 ~ 2227792 (+)
G164501 NA non-coding downstream 104619 2296533 ~ 2296987 (+)
G164510 NA non-coding downstream 179282 2371196 ~ 2371425 (+)
G164505 NA non-coding downstream 196714 2388628 ~ 2389777 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other upstream 255262 1802787 ~ 1838087 (+)
tspear tspear other upstream 332789 1744406 ~ 1760560 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other upstream 596969 1404101 ~ 1496380 (+)
G164126 NA other upstream 1521156 538279 ~ 572193 (+)
nostrin nostrin other upstream 1918424 131108 ~ 174925 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other downstream 298130 2490044 ~ 2492991 (+)
LOC103021746 LOC108436791,LOC107721608 other downstream 3076125 5268039 ~ 5298728 (+)
LOC107196936 NA other downstream 3925450 6117364 ~ 6123051 (+)
G165406 NA other downstream 3953023 6144937 ~ 6145969 (+)
LOC111194881 NA other downstream 3968486 6160400 ~ 6237986 (+)

Expression


Co-expression Network