G55905


Basic Information

Item Value
gene id G55905
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 8472237 ~ 8472724 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU63601
CACTATTTTGTGAAGTAGCTAACATAGTATAATCAGATGCAGCTTTATTTTTAGTAACAGTAATACGGAATTTTCTCCATCATACAATACGTTTTAAAATTAATTGCATGCCATTTATCAACACAAGCCATCCAGCATTTAATATGATATTCTAAAATCGATCTATCTTACTGCAGTGTGCAACAAGTGTCTCACAGCAGCCGTCGAGCGAACACACAGAGTAACGTTATAACATCATTTTCAACACACTCAAATGTATCTAATATGATAAACAGTGCTGTGTTACCTCATACTCATGACCGGAAAAGCGGAAGCAGCGCCGGCGACTGTGGCATAATAAAAGTTCCGCTGCTCGCGGCGTGTGTTGCATTCGTCTCTCATTAACAATCATTCCAGTGGCCTCGTTCAGCTCCCACAACACTCAGTCCTGCTCTGCTTCATACTACAGTAACATTAATAATCGCATCCATGAACATGATTTCTTCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63601 True 488 lncRNA 0.40 1 8472237 8472724

Neighbor

gene id symbol gene type direction distance location
CI01000009_08444920_08447297 GYPC coding downstream 24940 8443597 ~ 8447297 (-)
CI01000009_08419132_08424961 FAIM, FAIMA, FAIM.L coding downstream 47025 8418976 ~ 8425212 (-)
CI01000009_08389932_08402359 NA coding downstream 69215 8389633 ~ 8403022 (-)
CI01000009_08363231_08372375 DHRS12 coding downstream 99799 8363171 ~ 8372438 (-)
CI01000009_08337497_08351090 INTS6 coding downstream 120167 8337018 ~ 8352070 (-)
CI01000009_08495464_08536041 CNTNAP5A, CNTNAP5 coding upstream 22476 8495200 ~ 8537119 (-)
CI01000009_08545736_08549056 NA coding upstream 72832 8545556 ~ 8549056 (-)
CI01000009_08683782_08694491 NA coding upstream 210956 8683680 ~ 8695421 (-)
CI01000009_08700152_08716708 NA coding upstream 227396 8700120 ~ 8717074 (-)
CI01000009_08718943_08719773 NA coding upstream 246083 8718807 ~ 8722094 (-)
G55891 NA non-coding downstream 39655 8432249 ~ 8432582 (-)
G55890 NA non-coding downstream 41075 8430948 ~ 8431162 (-)
G55821 NA non-coding downstream 58447 8406853 ~ 8413790 (-)
G55886 NA non-coding downstream 84940 8378087 ~ 8387297 (-)
G55919 NA non-coding upstream 120203 8592927 ~ 8593301 (-)
G55948 NA non-coding upstream 124130 8596854 ~ 8597112 (-)
G56912 NA non-coding upstream 195991 8668715 ~ 8675414 (-)
G56929 NA non-coding upstream 240208 8712932 ~ 8714027 (-)
G55814 NA other downstream 44225 8425821 ~ 8428012 (-)
G53515 NA other downstream 2966989 5502395 ~ 5505248 (-)
G52828 NA other downstream 4240768 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 5210280 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 5572830 2883688 ~ 2893975 (-)
CI01000009_08858198_08860555 NA other upstream 385428 8856310 ~ 8860563 (-)
G59097 NA other upstream 3815493 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 5502664 13975099 ~ 13978614 (-)
G59490 NA other upstream 5560840 14033564 ~ 14037873 (-)
G59811 NA other upstream 6389673 14862397 ~ 14887464 (-)

Expression


Co-expression Network