ehhadh


Basic Information

Item Value
gene id ehhadh
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 1806395 ~ 1822220 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680052.1
CCCTGCTGTTAAACTCCAACCAGCAGTTCCAGCATGACTGTGACTTTTGTTCCACTTTCCTGGATTAAAAACAGCCCTGAATATCAGTGACCTCAGGATCAAAGTCCTGCAGAAGTCCTGCAGAAGCTCCAGATCTTTATTCCAGCTCCATTCAGCTGAACTAGCTCCACTGTCTGAGCTGTATTGATCAGCTATGGCTCAATATGCAAGAACTAAGGGATCGATCGCATTGATCACTCTCACTAACCCACCTGTGAACGCCCTCAGCTCTGCAGTGAGGAAGGGCATCACTGAGACTGTTTCCAGAGCGCTCAACGACACACAGGTGAAGGCTGTGGTGCTGTGTGGGGAAAATGGACAATTCTGTGGAgGAGCAGATATTAAGGAGTTTGCTAAGCCCATGTCTGGACCGGCGCTGGTGCCCATGATCCACGCTATAGAGGCGGGGGAGAAGCCGGTGGTGGCGGCTATAGAGGGCATAGCGCTCGGAGGGGGGCTGGAGCTGGCACTGGGCTGCCATTACCGTGTGGCTCACGCCAAGgctCGTATGGGTCTTCCTGAGGTCACTCTGGGTTTGCTCCCGGCTGCTGGAGGAACACAGCGTTTACCCCGACTCACCGGAATCCCTACAGCCCTGGAGCTCATTACTacaggTCGCCATATTACTGCTCAGGAGGCGCTCAAACTCGGCATCGTGGACAAGGTCACAGACGGCAACGTTGTTGACGCAGCTATGGAGATGGCGCTTAGtgttatagGTCGCCCCCTGTCCCCCCGCAGGCTGAGTACCCTTTCCACCCCTCCCCTGGCGAATCTGGATGGTGTTTTCGAGGCGGCGATGGCGCAGGTGAAGCGGCGCTCTCGCGGCGCGATGGCTCCGGTGGCGTGTGTGAAGGCGGTGAGGGCGGCAGCCGAGCTGCCCTACAGTCAGGGCATGAAGCGCGAGCTGGAGCTGATGGGCACCCTGATGAGCTCCGGCCAGGCTAAAGCACTGCAGTACTGCTTCTTCGCCCAGAGGGCtgttgggaaatggagtcttccTAATGGAGCGCAGTGGAACAACAGCAGGCCCAGAGATATACGCACAGCCGGGGTCATAGGTTTGGGCACTATGGGAAGGGGAATCGTGGTGTCTCTGGTGAAGGCGGGGATCTCGGTGGTGGcggtggagatggaggagaagCAGCTGGATCTGGGCAGGAAGGAGGTGACGGGGATTCTGGAGCGAGACGCTAAGAGACGGGGGGTCACGGCTCCCCTGCACCTGATCTCCTTCGCCCTGTCCCTGCAGTCTCTGAGGGGGGTGGACCTGGTGATCGAGGCAGTGTTTGAGGACATGGAGCTGAAGAAGAGAGTTTTTGCAGATTTGAGTCGAGTCTGTAATCAGAACACGATGCTCTGCACCAACACCTCCGGGCTGGACGTGGACCAGATCGCCTCGGTGACTGACCGACCCCCGCTGGTGGTGGGGATGCATTTCTTCGCCCCGGCTCACGTCATGAAACTGCTGGAGGTCGTCTGTGGACCCCGATCCTCAGCTGAAGCTGTAGCTACTGCTATGAGCTTGGGGAAGAGGATGGGGAagGTGAGTGTCGCTGTGGGAAACTGCCCAGGGTTTGTGGGTAACCGCATGCTGAAGTCGTACATGGACGAGTCTGTCTTCCTGCTGGAAGAGGGCGCCTCACCGGAGCAGGTGGATCAGGCACTGGAGGAGTTCGGCTTCGCTCTGGGAATCTTTAAAGTGGGGGATCTGTCCGGGCTGGACGTTGGATGGAGGGTCCGGAAATCCTCTGGACTGATCGGACCTGACGTAAACCCCACGTTCCCCTCACGTGTTCGCCAGGGCCGCAGgTACTGTCCTCTCCCTGACCTGCTGTGTGAGCAGGGTCGTTGGGGTCAGAAGACGGGGCGGGGGTGGTACCTGTACGACTCGGCCGGGGGTAGAGTGGCGAGGCCTGACCCGGAGATCCAGCGCTTCCTGCAGGACTACCGGCTCCGCTACGGGATCCCGTCCCGCCGGATCAGCGAGCAGGAGGTGGTGGAGCGCTGCGTCTTCGCTCTGGCTAACGAGGGCTTCCAGGTGCTGGAGGACGGCATGGCGGCAGGGCCCGAAGACATCGACATGGTGTACGTGTTCGGTTACGGCTGGCCCCGGCACCGCGGGGGGCCCATGTTCCACGCCGCTCAGGTGGGCTTACCCAGAGTCCTGCAGAGGCTGGAGTTCTACTACAGAGAGAACCCCGACATCCCCCACCTGCAGCCCAGTGCCCTGCTGAGGAGACTGGTGGGGGCAGGAAGCCCCCCCATACAGCAGTGGAAACAGTACATCCGCAGCACACACAGCCAGCTGTAATATACACGCCATACATATAACCACAACACAACAGCAGCTAATCACAAAAGTATAGTGTGTAATCAGAACAATACAGTGTCTAATAACCAAATACAGCGTCTGATTGtaacacaataaatataaacagaacaataaagcatctaataataatacagcaaaTAATTATGTCTGATCACAAAAGTACAGTGTCTAACCACAACACTACAGCGGCTAATCCCCAAGCACAACATTTAATCCTTATATAGCAGCTAATCACAAAAGTATAGTGTGTAATCAGAACAATACAGTGTCTAATAACCAAATACAGCGTCTGATTGtaacacaataaatataaacagaacaataaagcatctaataataatacagcataataaTACAGCAAATAATTATGTCTGATCACAAAAGTACAGTGTCTAATCACAACAATTCAACATCTAATCCTAATACAGTGTCTAATCCCCAAGCATAACATGTAATCCTAATGTAGCAGCTAATAATCAAGGACATCTAATCCTAATATGGCGTCTAATCACCAAATACTGCATTTAATCACAATAATGCAGTGTCTAATCTCCTAATACCACATCTAATCTTACAACAGTGTCAAAACACCAAAAACAGCATCTAATCACCAAATACAGGATCTGATtataaaacagtatatataatataagcatAACAAAGGCAAtggcagataaataaatatcaataacagtaactgtaactgtCCTTTAATATCATAATGTCTTATATATCGTGCCAAAACCCCAATATAGTGCCTTTAGAGGACTGGTAGTGTAATGTATGAAGTTTGTTATTTTGCTTTTGACGTTATAAAATGGAGCAAAAAGGAGCCGGAAAGTAAACTTTTTAACGCAAACCATCTGATTTAGAAGATAATCAGATGAATAATCAGTTTCAGAGAAACTAAGTCAAAAATGaaatcatatatattaaatcatataaaaGCACAGTATGACTGTGTATGAGTACTCACAGTATGAGTAAATCGATGAAGGGAAATGATcagtttaaacttttaaaatgtaatacttgttgattaattttagttttttgttattttgcttAATCCAAAAATGCTGTTCACAGGTCAGACAgaaatgaaaatgtgaaaatatgtgcctaaaatgtgatgttttaatgcttttctGATCAAAGTGCAAAGTTCTCTGTGTGAAATGTTACAGAGCAGTGGTTCTGTGAGTCTGTTCTGACCTGTGCAGCAATGATTTACACTGAGCAGCTTTAAGCTGAACACTGTTcatttgtttgctttgtttaagATGTTAAATTGTTGTATAACAATGTTTCAAACAATAATAAAGACATTATTTTACGTtgcataataacattttataaagttCAAA

Function

NR:

description
peroxisomal bifunctional enzyme

GO:

id name namespace
GO:0006635 fatty acid beta-oxidation biological_process
GO:0005777 peroxisome cellular_component
GO:0050662 obsolete coenzyme binding molecular_function
GO:0016829 lyase activity molecular_function
GO:0016853 isomerase activity molecular_function
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity molecular_function

KEGG:

id description
K07514 EHHADH; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680052.1 True 3741 mRNA 0.49 9 1806395 1822220

Neighbor

gene id symbol gene type direction distance location
LOC103028997 NA coding upstream 9648 1783878 ~ 1796747 (+)
LOC103029311 NA coding upstream 23354 1775451 ~ 1783041 (+)
LOC103030276 LOC103030276 coding upstream 81443 1719292 ~ 1724952 (+)
slc4a10 slc4a10,LOC557642,LOC107674766,LOC107730592,LOC107722898 coding upstream 1055909 675060 ~ 750486 (+)
tbr1 tbr1,LOC106511624 coding upstream 1139591 660601 ~ 666804 (+)
nup35 nup35,LOC106582498,LOC107749876 coding downstream 48266 1870486 ~ 1878855 (+)
LOC111194854 NA coding downstream 57928 1880148 ~ 1882693 (+)
znf804a znf804a coding downstream 271129 2093349 ~ 2191914 (+)
LOC103024889 nxph2,LOC108413064 coding downstream 618436 2440656 ~ 2473897 (+)
kansl1l NA coding downstream 781838 2604058 ~ 2655714 (+)
G164376 NA non-coding upstream 97754 1706881 ~ 1708641 (+)
G164284 NA non-coding upstream 816882 989297 ~ 989513 (+)
G164282 NA non-coding upstream 853966 952065 ~ 952429 (+)
G164276 NA non-coding upstream 861521 944597 ~ 944874 (+)
G164253 kcnh7,LOC106917580,LOC103474219,LOC101482208 non-coding upstream 960918 839881 ~ 845477 (+)
G164400 NA non-coding downstream 54224 1876444 ~ 1877085 (+)
G164404 NA non-coding downstream 80846 1903066 ~ 1906873 (+)
G164475 NA non-coding downstream 293623 2115843 ~ 2118502 (+)
G164479 NA non-coding downstream 356882 2179102 ~ 2180592 (+)
G164467 NA non-coding downstream 370595 2192815 ~ 2193188 (+)
tspear tspear other upstream 45835 1744406 ~ 1760560 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other upstream 310015 1404101 ~ 1496380 (+)
G164126 NA other upstream 1234202 538279 ~ 572193 (+)
nostrin nostrin other upstream 1631470 131108 ~ 174925 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other downstream 667824 2490044 ~ 2492991 (+)
LOC103021746 LOC108436791,LOC107721608 other downstream 3445819 5268039 ~ 5298728 (+)
LOC107196936 NA other downstream 4295144 6117364 ~ 6123051 (+)
G165406 NA other downstream 4322717 6144937 ~ 6145969 (+)
LOC111194881 NA other downstream 4338180 6160400 ~ 6237986 (+)

Expression


Co-expression Network