maats1


Basic Information

Item Value
gene id maats1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 5801891 ~ 5834662 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680107.1
TCTCCATGGTAACCGCTCAGGCTGCGCTCGGGCTGCAGTGTTTGTGTTAGCAGCGATAGCTAATGTTAATAAATCtaattattacagtttaaatcagcctgtaaataaaaatgaacatctCCCTGACGTTTAACAAGAGAAATGGGGCTCAGAGAGGATACAGAGCACAGAGAACATACGATTATCTGTACGATCCAACTTTCTCTTTGTCGAGTGAAAGAGACCACAGCAGGGTGGCCATCCAGGCCCAGGCCTCCTCAGACCGGGCGAGGAGAGTTCCAGAATTTAATTCCATGTTCAGTAATCTCCCTCACCACCCACGTTTCACACTGCGTCTGGATGCTGCTGACCCCGTGCCAGCTTTTATTGATCGGCGCTGGAGAGGTCAATCAGAGCAGCGGAGAGAGGCTCTAAAGACACTGTCAGGGATGCTGCCAGGGATTCAGCTCCACAAGCCGAGCATGGTTGATGTGGCCAGAGTGGACCACTGGAGGTTTTTTAGGCGTCCACTCATCCCTTTTTTCCAGCAGGTTCCTCCTGATGTTGTTTTGGCTTTACCCAATGCTGACCCCCTGTCTGTCAGGAATGGTGATGCTGCACGGCCGGGCAGTCCCTTTCAGCGCACAGTGGGAGTGCAGACAGATTACCGGGACAGCGAGGCACAGACAGAACCCTACAGTCCAGAGTATACACTGCGTCCTGGGACAGCCCCCCCTGAACTCCTCACCTTGGCTAGTCTTAAATGGGgACACGGGCTGCCTGCCAGGCTGGAGGAGGTGGAGATGATCGAGAGGGCAAGGATGAAACGGGCCTGGGAGGCAACTCTTCCCCCGTTGAATGATCTTACTCAGctagagaagagaaagaagatgaTGGATGAAATGGAGAGGAAAGAGTGGGCTTTCAGGGAGCAGGAGATCGAAAAgcTGCAAGAGGCTCGTCTGGCTCTGCTGAAGCAGCTCCTGCAGCAGAGGGAGGCTCAGCAGGAGCAGTCCACGGTGAAGAGGCTGGACCTGTGCTTCTCTCAGCagaagagacagaaggagagcCGCCTCCAGAAGATCCACCGTGACTATGTCCTGTctCTCCGGAAACTCACAGCACAGCGAAGGAATGTGGAGGGGAAGTTGGAGCGGCGGGACATTATTAATGACCAAGCTGATTACGCCTCACAGACATACGCTCCTCTCTCTCGCTGCGGGGTCTTCCCCGACCGGGGCACTGAGCGCAACGTGGTTAAGAGCCGCTTCCTCAACACATACCAAGGTTTGCTGGATCTGGAAGCCAGTCTTCCACCATCAGTGCTGGAGCCGAGAATTAAAGCACCTaaacccaaagagagcaagagctTCATCAAACGCTCAGAGCGCAGGGAGGTGGAGCTGTTGAGAACTTACCAGGCTCTGAAAGATGAGAAGGGCCGCGTCAAAGAAAAAAAGCCTTTGCGCTTTCTCTATAAAACGGAAAAACCGGTGCCTCGCCCACCAACACCTGAGGTTGACATGCCTCCTGAGGGATCAGAGGAGAGGGATCTTGCAGTGATTTACCTGCAGAAGCTCCTCCGTGGAAGATCCATCCAAAAACAGATGCTGGAGGGCAGGGAGAAGCGCATGGAGCTGATCCAGGAGCTGCGCACCACCCACGCCCTGCAGCGGGAAGAGCAGGAGCTGCACAGAGCAGAAAAACTGGTCACACTGGACCTGCAGCGCCAGCGAGAGCAGCACGAAAGCAGGacttCCCAGGTTGAAGGCTATGTCTCTGGCCTCTTGGGAGCAGAGCTGGTGGACATGCTGGACTTTTTGGCTAAGGAGTTGGTTCGTCTGCAGGATGAAAGGCGAATCCATGCTTTCACACTATTGGCTGAAAGAGACCGCCGCCTCCAGGAAGCAGAGGAGAGCGGGAGAAGACAGGTGGAAGAGAGGAGACGGAGGGAGGAGGATGAAATCTTTAGACAGGTGGTGAAGGTGCACCAGGCCACAGTGGATCTGTACCTGGAGGACATCATCTTGGGTACCATTGAGCAGACAGCTGATGCTCAGGCCAGAGAGGAGATCCACCAGATGGCTCAGGAACTCAATGACATCACCTACGCCATGGAGGAAAAgaggagcactgcgcAATCCGAAGACATTGTGGCTGAGCTCGTCTACAGTTTCCTCATTCCTGAGGTGCAGAAGAtcactgtgagagagagagTCAGGCAGAGTCAGAGGAGGCACCTGACTGCAGCTCGCTCCCTCATCCACAGTGCTGACAGCTCCTCCACAGGCAGTCCTGCCCGAGCCCCCCGGCCCAGATCACCCTCAGCCAGGGCCTCCACTGCCCTGCTGTCTCAGATAGTGGACCAGGTGGAGGAAGCAATGACCTCTGAGACCCCCGGACCCAGTACTGATCATCAGGAGAACAAACACACTGATTAACGCAGAGCCCTGAGGAGAATCAAAGCGATCTTGTGGGGAAACGTGACACACAGCCACGCAGCACAGAGGGAATAAAAGCACCGTTGTCCAGAGATTCTATCATACGTTCAGCCAATAAAGCAATTTATCTGCGAATGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680107.1 True 2559 mRNA 0.54 18 5801891 5834662

Neighbor

gene id symbol gene type direction distance location
btla NA coding upstream 162953 5628989 ~ 5638938 (+)
LOC103047200 sik1,LOC108436788,LOC105908677,LOC103352856,LOC106940689 coding upstream 364659 5423935 ~ 5437232 (+)
LOC103021436 ube2a,ube2al,LOC103021436,LOC103029486,LOC108259060,LOC107552373,LOC105934920,LOC107588833 coding upstream 496782 5300599 ~ 5305109 (+)
LOC111194874 NA coding upstream 568252 5219361 ~ 5233639 (+)
LOC111194953 NA coding upstream 787312 4996621 ~ 5014579 (+)
nr1i2 NA coding downstream 819 5835481 ~ 5862907 (+)
LOC103026554 LOC108423842 coding downstream 454888 6289550 ~ 6293768 (+)
tmprss3 tmprss3 coding downstream 461524 6296186 ~ 6307328 (+)
ccdc148 NA coding downstream 793944 6628606 ~ 6733187 (+)
LOC103030586 acvr1 coding downstream 926689 6761351 ~ 6832556 (+)
LOC111194876 NA non-coding upstream 39040 5747321 ~ 5762851 (+)
G165283 NA non-coding upstream 48439 5750683 ~ 5753452 (+)
LOC111194877 NA non-coding upstream 54614 5744902 ~ 5747277 (+)
G165273 NA non-coding upstream 71902 5712680 ~ 5729989 (+)
G165276 NA non-coding upstream 81917 5719045 ~ 5719974 (+)
G165316 NA non-coding downstream 30804 5865466 ~ 5868000 (+)
G165323 NA non-coding downstream 37579 5872241 ~ 5931151 (+)
G165326 NA non-coding downstream 42762 5877424 ~ 5878740 (+)
G165343 NA non-coding downstream 163365 5998027 ~ 6004101 (+)
LOC111194857 NA non-coding downstream 268526 6103188 ~ 6105756 (+)
LOC103021746 LOC108436791,LOC107721608 other upstream 503163 5268039 ~ 5298728 (+)
G164539 spopl,LOC107751611,LOC108413068,LOC102233870 other upstream 3308900 2490044 ~ 2492991 (+)
LOC103028062 cunh3orf70,zgc:162707,LOC107668408,LOC107749877,LOC107752906,LOC107596553,LOC107592986 other upstream 3963804 1802787 ~ 1838087 (+)
tspear tspear other upstream 4041331 1744406 ~ 1760560 (+)
LOC103047444 myo10l3,LOC108413799,LOC102206624,LOC102799206,LOC101480403,LOC102301787,LOC107087138,LOC108240768,LOC107677785,LOC107752883 other upstream 4305511 1404101 ~ 1496380 (+)
LOC107196936 NA other downstream 282702 6117364 ~ 6123051 (+)
G165406 NA other downstream 310275 6144937 ~ 6145969 (+)
LOC111194881 NA other downstream 325738 6160400 ~ 6237986 (+)
wdr4 wdr4 other downstream 505333 6339995 ~ 6345403 (+)
LOC103040759 speg,LOC108423902,LOC108266540 other downstream 1550471 7385133 ~ 7485349 (+)

Expression


Co-expression Network