G57077


Basic Information

Item Value
gene id G57077
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 9396295 ~ 9396901 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU65011
CCTCAATCCATCTCTGTGCTTCTGANNNNNNNNNNTCATAACCCACTGCACTCTGCGGTCGCCACTCCATCACCGGTCTTAAGTGGTGAAGCTGTAATGAAACAGGCGTCTACACTCCAAGAGCGCGCGCAACACGCGCGTAGTCAAGACGCAATCGTTGTTTCACCGCGTCGCGTGAATATGTTTAAGACTACCAGGTTTCTTTAAAAAACAAAAAAACAAAAAAAAACAAAAAAACAAAAGAAGTCAGCCGGTAAAACGCTTTTCTTATTCGACTACCAGTATCAAAACTATCACTCTGTCGAACGTCAAAGACCAACCCTGCTATAACAACCGTAAAGGACTCAGTGTAAACTCTTAAATCTCTTGTTCTTTTACCTACTCCAGAGAAACTTTAGAGTTGCGTTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65011 True 411 lncRNA 0.42 2 9396295 9396901

Neighbor

gene id symbol gene type direction distance location
CI01000009_09383289_09389713 NA coding downstream 6582 9383289 ~ 9389713 (-)
CI01000009_09380339_09381069 NA coding downstream 15226 9380286 ~ 9381069 (-)
CI01000009_09378166_09378781 CRYGM7 coding downstream 17514 9378110 ~ 9378781 (-)
CI01000009_09375453_09376121 NA coding downstream 20174 9375181 ~ 9376121 (-)
CI01000009_09373830_09374425 CRYGM6 coding downstream 21870 9373830 ~ 9374425 (-)
CI01000009_09483061_09483927 KCTD12.1, KCTD12 coding upstream 84787 9481688 ~ 9484474 (-)
CI01000009_09494831_09498396 NA coding upstream 97851 9494752 ~ 9498396 (-)
CI01000009_09502714_09505047 TXNDC9, TXNDC9.S coding upstream 105772 9502673 ~ 9505047 (-)
CI01000009_09507352_09522340 REV1 coding upstream 110227 9507128 ~ 9522340 (-)
CI01000009_09565012_09566010 SOX1A, SOX1B, SOX1 coding upstream 167545 9564446 ~ 9568007 (-)
G57068 NA non-coding downstream 135816 9260261 ~ 9260479 (-)
G57044 NA non-coding downstream 227565 9118415 ~ 9168730 (-)
G57037 NA non-coding downstream 363545 9032227 ~ 9032750 (-)
G57053 NA non-coding downstream 447114 8948856 ~ 8949181 (-)
G56999 NA non-coding downstream 471467 8924587 ~ 8924828 (-)
G57020 NA non-coding upstream 43344 9440245 ~ 9447216 (-)
G57097 NA non-coding upstream 62956 9459857 ~ 9460086 (-)
G57106 NA non-coding upstream 78549 9475450 ~ 9475671 (-)
G57111 NA non-coding upstream 91417 9488318 ~ 9488539 (-)
G57114 NA non-coding upstream 160738 9557639 ~ 9569659 (-)
CI01000009_08858198_08860555 NA other downstream 535732 8856310 ~ 8860563 (-)
G55814 NA other downstream 968283 8425821 ~ 8428012 (-)
G53515 NA other downstream 3891047 5502395 ~ 5505248 (-)
G52828 NA other downstream 5164826 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 6134338 3261038 ~ 3262843 (-)
G59097 NA other upstream 2891316 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 4578487 13975099 ~ 13978614 (-)
G59490 NA other upstream 4636663 14033564 ~ 14037873 (-)
G59811 NA other upstream 5465496 14862397 ~ 14887464 (-)
G59941 NA other upstream 5735203 15132104 ~ 15132503 (-)

Expression


Co-expression Network