G15724


Basic Information

Item Value
gene id G15724
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 686073 ~ 705802 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU21270
gagagagtgctcactTGTAGCgcaaaaaacgggccaaagagtctaaaagcggagagagtgcgcatttctagcgcagaaaaacaggccaaagtctaaaagcggagagggtgcacatttctagcgtaggaaaacggagtaaaagagtctaaaagcggagagagtgcgcatttctagcgcaaaaaacgggccaaagagtctaaaagcggagagggtg

Function

NR:

description
uncharacterized protein si:ch211-108d22.2 isoform X15

GO:

id name namespace
GO:0005102 signaling receptor binding molecular_function
GO:0005515 protein binding molecular_function
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function
GO:0098772 molecular function regulator molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21270 True 214 lncRNA 0.46 2 686073 705802

Neighbor

gene id symbol gene type direction distance location
LOC111191737 NA coding upstream 76644 600428 ~ 609429 (+)
LOC103023152 NA coding upstream 127671 551043 ~ 558402 (+)
LOC103028849 NA coding upstream 161935 509572 ~ 524138 (+)
LOC107196798 NA coding upstream 191704 483139 ~ 494369 (+)
LOC107197531 NA coding upstream 217989 448393 ~ 468084 (+)
cryab cryab,LOC108259721 coding downstream 732004 1437806 ~ 1442109 (+)
LOC103029064 LOC103029064,LOC108428730 coding downstream 751668 1457470 ~ 1469889 (+)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203 coding downstream 791906 1497708 ~ 1500545 (+)
alg9 alg9,LOC107691744 coding downstream 828227 1534029 ~ 1549757 (+)
LOC103032850 ppp2r1a,LOC103032850,LOC108428700,LOC108260120,LOC107691746,LOC107745127,LOC107603174,LOC107663771 coding downstream 854047 1559849 ~ 1579498 (+)
LOC111194479 NA non-coding upstream 70834 613037 ~ 615239 (+)
LOC111194483 NA non-coding upstream 88343 593655 ~ 597730 (+)
LOC111194487 NA non-coding upstream 92440 592228 ~ 593633 (+)
LOC111191745 NA non-coding upstream 97766 583710 ~ 588307 (+)
G15656 NA non-coding upstream 147786 464564 ~ 538287 (+)
G15748 NA non-coding downstream 704131 1409933 ~ 1412569 (+)
G15749 NA non-coding downstream 709380 1415182 ~ 1420808 (+)
G15771 NA non-coding downstream 748525 1454327 ~ 1457428 (+)
G15813 NA non-coding downstream 875711 1581513 ~ 1581946 (+)
G15818 NA non-coding downstream 880976 1586778 ~ 1636251 (+)
LOC103031762 gnb2,LOC108428986,LOC107663406,LOC105023919 other upstream 564892 70784 ~ 121181 (+)
LOC103025578 NA other downstream 616714 1322516 ~ 1340800 (+)
fdxacb1 fdxacb1 other downstream 810695 1516497 ~ 1529417 (+)
G15839 NA other downstream 975357 1681159 ~ 1682022 (+)
nrgn NA other downstream 1444828 2150630 ~ 2171207 (+)
LOC103038305 NA other downstream 3810195 4515997 ~ 4517309 (+)

Expression


Co-expression Network