G15839


Basic Information

Item Value
gene id G15839
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 1681159 ~ 1682022 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU21431
gctaagcagttgctataatttctaaagtggttgctaagtggttgctaggcagttgctaacattttccaggtggttgctaaggtggttgctaagcagttaataggtggttgctaagccctggctggggtgccggggtgtccaaacttttgactgatagctgctccatacagcagctcctccatacactcacagtactggaggagcaggggagagaaggggttccgtgcgcagagctgctcgtgtgcgagatggaactctgggccccccattcatttctatggggAAACTTCGTACGACATTTGTACGAAATCCGTACGACGTATCGTTTCGTAAAGCATATTTTCGGAAAGAACTCAATAAGTTCTATAGGTCATCCGAATTTCAGCTTCATATCTTAAATATTGTGACGTTCACGGCCGTTCAAAATTCTCCTAGTTCATTGTCTATGGGAAAAAGGGCGTacgtttacgaagtttttacgaaaatcGTACGATGTATCGctccaaaaagcacaagcacacCCCGCGGCTATAAGTTCTACCATCGTGTGAAGTTTCGTGGTTCTAGCTCGAAAGCTCTAGGAGGAGTAGTTGTTTATAAAACGTGgcgagaataataataataataactagaaaaggcaaagttcgtgaacgaactttaagttggcttggaaaagtacgCTAATAACgttgaaaagttaaaatggttgctaagtggttgctaggtagttgtgatcattactaaagtggttgctaagcgtttgctaggcagttgctaacgttttccaggtggttgcttaggtgttgctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21431 True 810 TUCP 0.44 2 1681159 1682022

Neighbor

gene id symbol gene type direction distance location
btg4 btg4 coding upstream 11813 1664596 ~ 1669346 (+)
LOC103032850 ppp2r1a,LOC103032850,LOC108428700,LOC108260120,LOC107691746,LOC107745127,LOC107603174,LOC107663771 coding upstream 101661 1559849 ~ 1579498 (+)
alg9 alg9,LOC107691744 coding upstream 131402 1534029 ~ 1549757 (+)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203 coding upstream 180614 1497708 ~ 1500545 (+)
LOC103029064 LOC103029064,LOC108428730 coding upstream 211270 1457470 ~ 1469889 (+)
LOC103036563 hepacam coding downstream 505364 2187386 ~ 2203190 (+)
ccdc15 ccdc15 coding downstream 527623 2209645 ~ 2220704 (+)
slc37a2 slc37a2,LOC107691751 coding downstream 542014 2224036 ~ 2240887 (+)
LOC103037703 LOC108427349,LOC108259736,LOC107664292,LOC107556423,LOC107600796,LOC107712935,LOC571737,LOC107744331 coding downstream 562439 2244461 ~ 2259339 (+)
LOC103038019 LOC108428643 coding downstream 599734 2281756 ~ 2295500 (+)
G15818 NA non-coding upstream 44908 1586778 ~ 1636251 (+)
G15831 NA non-coding upstream 56782 1623926 ~ 1624377 (+)
G15813 NA non-coding upstream 99213 1581513 ~ 1581946 (+)
G15771 NA non-coding upstream 223731 1454327 ~ 1457428 (+)
G15749 NA non-coding upstream 260351 1415182 ~ 1420808 (+)
G15845 NA non-coding downstream 47808 1729830 ~ 1730349 (+)
G15890 NA non-coding downstream 146762 1828784 ~ 1829016 (+)
G15892 NA non-coding downstream 148519 1830541 ~ 1830742 (+)
G15920 NA non-coding downstream 312403 1994425 ~ 1994863 (+)
G15932 NA non-coding downstream 391517 2073539 ~ 2073838 (+)
fdxacb1 fdxacb1 other upstream 151742 1516497 ~ 1529417 (+)
LOC103025578 NA other upstream 340359 1322516 ~ 1340800 (+)
LOC103031762 gnb2,LOC108428986,LOC107663406,LOC105023919 other upstream 1559978 70784 ~ 121181 (+)
nrgn NA other downstream 468608 2150630 ~ 2171207 (+)
LOC103038305 NA other downstream 2833975 4515997 ~ 4517309 (+)
LOC103025913 NA other downstream 4486738 6168760 ~ 6177884 (+)
G16820 NA other downstream 4850374 6532396 ~ 6532868 (+)
LOC103032995 NA other downstream 5740549 7422571 ~ 7429391 (+)

Expression


Co-expression Network