Gene
RNA
| Item | Value |
|---|---|
| gene id | G56306 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 9647928 ~ 9654726 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64119 | True | 1471 | lncRNA | 0.51 | 12 | 9647928 | 9654726 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_09542674_09559750 | NA | coding | upstream | 87891 | 9540212 ~ 9560037 (+) |
| CI01000009_09499329_09500173 | NA | coding | upstream | 147729 | 9499329 ~ 9500199 (+) |
| CI01000009_09490460_09493598 | IRG1 | coding | upstream | 154295 | 9490460 ~ 9493633 (+) |
| CI01000009_09435601_09439347 | NA | coding | upstream | 208567 | 9435601 ~ 9439361 (+) |
| CI01000009_09390390_09394996 | UCHL3 | coding | upstream | 252606 | 9390390 ~ 9395322 (+) |
| CI01000009_09685457_09693885 | AFF3 | coding | downstream | 30731 | 9685457 ~ 9693888 (+) |
| CI01000009_09700487_09709797 | MPHOSPH8 | coding | downstream | 45761 | 9700487 ~ 9709983 (+) |
| CI01000009_09716074_09733349 | ZMYM2 | coding | downstream | 59646 | 9714372 ~ 9734378 (+) |
| CI01000009_09770695_09782443 | IFT88 | coding | downstream | 115969 | 9770695 ~ 9782536 (+) |
| CI01000009_09783235_09785477 | IL17D | coding | downstream | 128509 | 9783235 ~ 9785563 (+) |
| G56243 | NA | non-coding | upstream | 159384 | 9488185 ~ 9488544 (+) |
| G56242 | NA | non-coding | upstream | 161120 | 9486599 ~ 9486808 (+) |
| G56204 | NA | non-coding | upstream | 163958 | 9482094 ~ 9483970 (+) |
| G56225 | NA | non-coding | upstream | 268134 | 9379585 ~ 9379794 (+) |
| G56220 | NA | non-coding | upstream | 284384 | 9363315 ~ 9363544 (+) |
| G56320 | NA | non-coding | downstream | 14016 | 9668742 ~ 9669179 (+) |
| CI01000009_09866000_09866290 | NA | non-coding | downstream | 210620 | 9865723 ~ 9867040 (+) |
| G56383 | NA | non-coding | downstream | 218506 | 9873232 ~ 9876664 (+) |
| G56411 | NA | non-coding | downstream | 238107 | 9892833 ~ 9897455 (+) |
| G56412 | NA | non-coding | downstream | 243001 | 9897727 ~ 9898245 (+) |
| G56100 | NA | other | upstream | 517642 | 9129300 ~ 9130286 (+) |
| G53651 | NA | other | upstream | 3399536 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 3715127 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 4108874 | 5522242 ~ 5540638 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 6438944 | 3202207 ~ 3208984 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 198633 | 9853929 ~ 9856587 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 2106060 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 2279216 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 2777832 | 12432538 ~ 12436017 (+) |
| G57682 | NA | other | downstream | 3170743 | 12825469 ~ 12892339 (+) |
