LOC103025913


Basic Information

Item Value
gene id LOC103025913
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 6168760 ~ 6177884 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU22663
GTTCTGACTCTGTTCCAGTGTAAAGTCAAGACAACAGAAGATTAcagtttaaagagtttattgGGATTGCTGTAGAAAATTTATTGAACACCAAACAAATACACTGTAACCTCTAAGGATTAATTAAACTCTGTCTTGCAACAACACCCTGATTGAATGGTATTTTGTCCAGAAAAGTAACCAGAAAAGCTTAATTCAGAAAGGGGTAGCAGTAAATTTGGTcctaaaaattataaaacaaattaaaacatttgtacTAAAAAGTAGAAAGGGGAAGATCAGCTGTAGGGGTGAGGAGGGGGGTACATGCAGGAATTGACAAAAGGTGGGATGTCACTGAAGCTGCTTAGTTGTAGTATCTTGAAGAGCCTGACATGCCTCCAGAGTATCGGTCATTTGAACTGAGAGGCATACGTGAAGAGTAGTTCATGCTGCCAAGGGAGCTTGATAAGCCAGAACTGGGACCCGAGGAGATGCTTCGAAGGCGGTATTCCATCAAGACATCTGTAAGCTTCTGTGTGACCTTCAGCACAATCTGAGCATCATCTTCATTCTCAATACGAAAGGTGTCAGGCATCTGAGAAGTGCTGCAAGGGTGCTGCTAGACTCTGGGCCTTTAGGTCCACCTCCCATCATTCTTTCTCTGTCCAGGGAGATGTCACCAGGGTAAGGCCTGCCCATGCCCTCATTGCGTGGGCCCCCTCCAAAGTCATCTGATCCCATACGCATGGGTCCACTGTTGGGGAAACGCTGCATGTTGTCTGGGCTGCCCATAAACCTGTCAGGTCCCGGCCCTGAATCATACCGACCAGAGCCTGACAGTCCCCTATTCATGGGACTATCACCCAGACCTCCGTGCATGCCCGGGGAGAAATCTGACATCATTCCACCCCGAGGAGGATACTCCCCCGGGAATGTGGGATCTGGAAAACCACCATCAAATGGGCCACCTGAAAAAGACAGACACAATGTTCAAATATTATGAACGTGTAGTTTTTT
>XM_007229447.3
GTGGAGAGAGCGCGCTGCCTCTGTCTGAAGCACGAGGCGTTAGGTTGAGGCTGAGCTCGCTGTGAGGCTTGTGAAGCTTGTGAAGTGAATAAACGCGGGTGTTTGGAGCGCGGTTTAAGAGTAGTGTCCGTTTTTTCAGGAGAACTGAGAGCAGTGTCACGTGTTCGACGAGGCAGTTTCCCGCCATCATGGTGATAGTGCGGCGTTTGCTGGGCCTCAGTGCCGATGCAGGCTCTGAGGACATTCGCGCCTTCTTCCACGGCCTACACATTCTTGAGGGTGGAGTTCACATCATTGGTGGCAAGAGAGGAgaggcttttattatttttaccacAGAGGAAGATGGACAGCTGGCCATGGAGCGCTCTGGGGAGATTCTCAAGGGATCATCGGTAACCCTtgaggttagcagcatagcTGACTTGAAACATAAAATTGAGTTACgcttaaaaaagcaaagaagcTCAGGAGTGGAAAACAAGAAGTCTGATgcagagaggaagaaggaaaaaatggagaaagaggcagaggagaagaagaaagcaGAGTATAAAAGAAGAAAGCTGGAGTTGGAAAAGAAGGCATTGGATCCAAGGCCAGCACCAGAACCGCAGCCATCAAAGTCACCAACAGACTTGGGCACAGCTCTACTACTGGGCCTAGTGGCTGCTATTCAAGGATTACAGTCAAACCATAACAACAACATCATTATCAAcaacagtagcagcagcagcaacaacaacaaagaaaGCCAAGCCCAGTCTCTGCCAGTCAGTTCTCACCCATTACCTGCTTTACCTGAGCCATACCATTCTAAAAACCATACAAATCAAAGAACAGACCATCATACgtacaacaacaataaaaagaaaaactacaaCCACAGCTACAAACTGCAGGAAAGCATTCCACAGCCAGTGAGAAAAGTGCAtattgaagaagaaaaagaagcaacagcagcagcacctgAGAGAGGTAAGGCCAAGACCAACTGCAACGAGCCTGGATATCTTCGTCTTTATGGGCTTCCCAACAACGTGACCCTACAAGATGTCCGCACTTTCCTCCAAGGCCTCTCTGTGCTGGATTTCATACCAAATGTCTTCCTAGGCCGCGACCAGTGCTGCCTAATAAAGGTGGCTACTTTGAAACAAGCTGAAGAGGGCCTAAAGTACAGCCACATGAGCTACATGGACTCCTATGTGGAGGTAAGAACGGCCTATGAAAGGATGTGGAGCTACGCTTTAGAGCTGGATGATGAACATGGCCCCTGTTCCACCACATCCTCAGAACTGGACCACCGCCTCTCTCCAGACAGACATTCGTCCTGGATGCCGCCACTTAAGCGACGTTCAGAAGACAGGTCGCTTTCAGGATCTCCAAAGCGGCAGCGCTTTGACTCTCAGCCCCCTGGACAAGTGCACTGCGTTATGGTAAGGAACCTTTCTCCAAAAACGACCAAAACCGAGATAAAGGAGCTATTTGGCTGTGTTCACATCCCAAACAAGAAGATCATCCATCTGCAAAACTGCTGGGGACAGCGAACGTCCACCGCTTTCATCATGTTTACGCACCCAGAGGATTACGCCGCAGCCATGAACATGGATGGTACACATTATGGCTCAAAAGTGCTAGATGTATCATCCATCACAATGGAAAAAATGAGGGACATAATGTacaaagaaagacataaaaagGCTCCGAGACCAGCGTATCACAGAGAACAAGACTGGTCTGAGCGTACCTGTATCTATGCTCGGAACTTCCCAGCTGATGTTCGGAGAGGGGAGGTGAGAGACTTTTTCTGTCTGTACCAGATTGACGAAAAAGATGTTACACTCCTCAAGGATGAGAAGGGAAACAGTATCGGGGAGGCGGTAATCAAGTTCATGTCTGAAGAGGCTGCCAAAGAAGCTTGCAGTCTGCATGGAAACatatttttgggacaaaaaattATGCTTACCTGTGTTTCACCACAGCAGATGAAGACTATTCTGCAGGAACCACATTAAACCAAGAGCTCTGAGAACATTCCAAGGAGGAGGACTGTCAAAATGTGCCTGGACGAATAAACTGTCAACTGTACATATAAAAGACTTGCAAGTACTACAGCACTTGTCTTAAAGTGTTaaactatttacatttaaatgtaaatgcacaTTTGCATGAGAAACACAGTCGTACAGTCTTAATTCAAAAGCCTGGTGTTTTTCCTTGCCCAAATTAACAGTGGTCACTATAAAGGTTTTGATTTCACAACTGTGTTTCTCCTGTCTAAAACATGTTACATGTTTaatgttctaaaaaaagtttttttattagtaatgtgtaataaaaatgtgaaatgcgCATTGAGATGCAATCAAGTGGAATTATTTTCATGGTTGCAGTGTGTGCACACACTCATGCCAAATGGTATGGCTGTGTCTGAAACTGGAAATTGCTTAGTTGACTTTATAACCTGCCAGCTCAATACTAGATATTAGTGTTTACTGTCATTAGTATTTTCACctaataaaaaagtacattGATTACCAAACTATAAATTCAGATGTTATTGAGTGCCTTACTGCATCTGAATCCTATCCATGTTTAAGTTTCAGATACAGCCTTTAAATAATTCCACATCTGTATGTTTGCTCATCAAAAACGAGGTATATGAGAAAACAGCTGCCAAATCTTCATGTGTGGACAGATACTGACGTTTTGTTTGTGTTGGTCTGGACTATTCCAGGACATATTGTTGTTGCCTAAAGACAAACTTGTTTTCTAGTATAGTCGTTTGTACTAGAAACtttacaaaagaagaaaaataacattGATTTATGGAAGACAGTATAAAATGTACTGTGAAAATAACTGCATTTTGGAGCATTCCTTATGATttagttttcacacattatAAATTACAACTGGAgagacatgtttttatttagtcagCAACAAAATATGTTTGTAAAGTGTTGAGATGGATGTAAAGATTCTAAAGTGACTTGTTAGTACAAGTAGTAGTAATTTCTACACTCAAGCAAAAATGTTCTATATAGCACTAAACTACACATAATACGCATTGATGCTGGATGCCAAATGCCCTACGCTTGTGTTACTGTTTTTCTGCTAtgaacacacctgatccaacttaTTAGCTCATTAACAGCCCGTTTTTACACTGAAGGATGCGtgttaaagcattaaaacatgCAGGGCAGTTTTATATAGAACCATTTTGGTTGTTACTGAGTCAAACTTCCTTTAACAGGGCTCTCACTTTTTAGTTAAGCATTTTCCAGGACATACAGCAGTTTAAGACAAGgtagatttgtttgtttttttgacaaGTGTAAcataacactaaaataaaggttATTTAAAAGTTAGGTGAGCTTATCTGAACTTTAAATCCTGCTTTAAAGTGATGGATTTTGTTCTTGCTGGAAGTCAGggaaaagttaatataactgaATCTCAGTGTACATTCTACACATAGTTTATGTACAGATTACAACAAAGGGGTCATTTGGAATCTTAAGTAATGATtttgaagatatatattttgattccagtcataaataaatgtgttcatgTCACACACCTTTGTCTTAAAAGCTCCTGTTTCACTTCCTGTTATGTCAAACATATGAGCGAAATTAACCACAGCGTTGGCTTATTTGCATTACAAGAACCAAACAGACTGAGGGTGAGATTAAGAGTTTGAGGTgatctttattgttttaattaaaatgtttaacttcACACAGCATGTTCTGACTCTGTTCCAGTGTAAAGTCAAGACAACAGAAGATTAcagtttaaagagtttattgGGATTGCTGTAGAAAATTTATTGAACACCAAACAAATACACTGTAACCTCTAAGGATTAATTAAACTCTGTCTTGCAACAA

Function

GO: NA

KEGG:

id description
ko03430 Mismatch repair

RNA

RNA id representative length rna type GC content exon number start site end site
TU22663 False 999 TUCP 0.38 4 6172756 6177884
XM_007229447.3 True 3905 mRNA 0.41 2 6168760 6172899

Neighbor

gene id symbol gene type direction distance location
LOC103023602 LOC107579097 coding upstream 88709 6049397 ~ 6080051 (+)
tbrg4 NA coding upstream 136017 6012790 ~ 6032743 (+)
znf804b NA coding upstream 504117 5440694 ~ 5664643 (+)
LOC103032089 stoml3,LOC102781741,LOC105011208,LOC108236983 coding upstream 959797 5198691 ~ 5208963 (+)
LOC103032405 slc25a15,slc25a15a,LOC107561472,LOC107670691,LOC107593465 coding upstream 973237 5186497 ~ 5195523 (+)
tex10 tex10,LOC107706105,LOC107689903 coding downstream 7597 6185481 ~ 6229459 (+)
erp44 erp44,LOC107593692,LOC107723539,LOC107706132 coding downstream 115188 6293072 ~ 6323895 (+)
alg2 alg2,LOC107595974,LOC107706186 coding downstream 366391 6544275 ~ 6552001 (+)
frrs1l frrs1l,LOC107595962 coding downstream 415583 6593467 ~ 6603875 (+)
tmem245 tmem245,LOC107687814,LOC107706205,LOC107723436,LOC107595951 coding downstream 429101 6606985 ~ 6641935 (+)
G16755 glipr2,glipr2l,LOC107706057,LOC107689891 non-coding upstream 68410 6091736 ~ 6100350 (+)
G16739 LOC108426361,LOC108256403 non-coding upstream 160712 6002303 ~ 6008048 (+)
G16736 NA non-coding upstream 211881 5955445 ~ 5956879 (+)
G16732 NA non-coding upstream 274283 5892670 ~ 5894477 (+)
G16719 NA non-coding upstream 372750 5795687 ~ 5796010 (+)
G16777 NA non-coding downstream 36702 6214586 ~ 6216617 (+)
G16779 NA non-coding downstream 53381 6231265 ~ 6233096 (+)
G16799 NA non-coding downstream 179680 6357564 ~ 6360468 (+)
LOC111194764 NA non-coding downstream 237978 6415862 ~ 6438882 (+)
G16824 NA non-coding downstream 358995 6536879 ~ 6538980 (+)
LOC103038305 NA other upstream 1651451 4515997 ~ 4517309 (+)
nrgn NA other upstream 3997553 2150630 ~ 2171207 (+)
G15839 NA other upstream 4486738 1681159 ~ 1682022 (+)
fdxacb1 fdxacb1 other upstream 4639343 1516497 ~ 1529417 (+)
LOC103025578 NA other upstream 4827960 1322516 ~ 1340800 (+)
G16820 NA other downstream 354512 6532396 ~ 6532868 (+)
LOC103032995 NA other downstream 1244687 7422571 ~ 7429391 (+)
LOC103041197 NA other downstream 1990955 8168839 ~ 8184837 (+)
G17414 NA other downstream 2497735 8675619 ~ 8716787 (+)
LOC111191971 NA other downstream 2713360 8891244 ~ 8899645 (+)

Expression


Co-expression Network