XLOC_000741


Basic Information

Item Value
gene id XLOC_000741
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 55314474 ~ 55579436 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003219
GTTTCAGGTGAAGACCACTGCTTTCAGCTCATATCAGgaaactcatctTCTGGACTGATTAGTGGATGAACAGAAACACATCTGTCATAGATGACAATGACCGGCATAATTCTGCATAAAAGGTTTCTAAAAGCACCGAGTACCATCTCTGTCATAATGCATTCCACACTTATCTTGGCCTTTCTAATGGTTACACCAGTGATGAGCACGGCTGcTAATCTGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003219 True 224 lncRNA 0.42 6 55314474 55579436

Neighbor

gene id symbol gene type direction distance location
XLOC_000740 si:ch211-286b5.8 coding upstream 3771 55304374 ~ 55310703 (+)
XLOC_000739 zgc:172106 coding upstream 15301 55293424 ~ 55299173 (+)
XLOC_000738 si:ch211-286b5.6 coding upstream 27214 55279124 ~ 55287260 (+)
XLOC_000737 BX284640.1 coding upstream 38661 55264712 ~ 55275813 (+)
XLOC_000736 si:ch211-286b5.2 coding upstream 67221 55239160 ~ 55247253 (+)
XLOC_000753 adgre19 coding downstream 3680 55583116 ~ 55587666 (+)
XLOC_000754 umod coding downstream 21068 55600504 ~ 55606573 (+)
XLOC_000755 adgre18 coding downstream 29084 55608520 ~ 55617155 (+)
XLOC_000756 adgre7 coding downstream 63762 55643198 ~ 55646413 (+)
XLOC_000757 adgre8 coding downstream 83055 55662491 ~ 55668390 (+)
XLOC_000735 NA non-coding upstream 123212 55184764 ~ 55191262 (+)
XLOC_000733 CU467849.1 non-coding upstream 185895 55128465 ~ 55128579 (+)
XLOC_000729 NA non-coding upstream 329177 54959492 ~ 54985297 (+)
XLOC_000721 NA non-coding upstream 613719 54698173 ~ 54700755 (+)
XLOC_000715 NA non-coding upstream 700995 54611838 ~ 54613479 (+)
XLOC_000758 NA non-coding downstream 99476 55678912 ~ 55679447 (+)
XLOC_000760 NA non-coding downstream 135482 55714918 ~ 55729126 (+)
XLOC_000761 NA non-coding downstream 138142 55717578 ~ 55721415 (+)
XLOC_000768 NA non-coding downstream 837202 56416638 ~ 56556305 (+)
XLOC_000772 NA non-coding downstream 981790 56561226 ~ 56604352 (+)

Expression


Co-expression Network