G17648


Basic Information

Item Value
gene id G17648
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 9604916 ~ 9605232 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU23815
ttaataAGAGCGGGCACACTACGAGAGCAAACAGGAACTGAAGCTACACCAGACTGCGCTTTTTACTCCATTTTAACTGCAGCTACGCTGTAAGagcaacagcaaacgcgcttttcagcgcgctttttCGGACAAGGCTGAgcgattctcacttgagcggggcgtggcaaaccccctcatTCACACATTCTCTGTCTACACACCTCAGGGGCGTTACTCacgctttaaaagacagtctggtggagCTGATTTCCTATATCGCCCGCACCTGCGCGCAAATTCAGACTCCTATGTCGTCACTCACACTCGCCGAGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23815 True 317 lncRNA 0.41 1 9604916 9605232

Neighbor

gene id symbol gene type direction distance location
bloc1s5 bloc1s5 coding downstream 491011 9109014 ~ 9113905 (-)
txndc5 txndc5,LOC107730007 coding downstream 520630 9071382 ~ 9084286 (-)
LOC103047134 LOC103047134 coding downstream 625298 8975458 ~ 8979618 (-)
LOC103030846 LOC108426561,LOC103358366,LOC104935909 coding downstream 727791 8873882 ~ 8877125 (-)
LOC103029888 LOC103029888,LOC108426543,LOC107664666,LOC107550022,LOC107742254,LOC100704658 coding downstream 772995 8813024 ~ 8831921 (-)
gcm2 gcm2,LOC107552658,LOC107664656,LOC107707735,LOC107654664 coding upstream 465846 10071078 ~ 10078582 (-)
elovl2 elovl2,LOC101268971 coding upstream 497947 10103179 ~ 10118608 (-)
mppe1 mppe1 coding upstream 626281 10231513 ~ 10257873 (-)
LOC103028097 tnip3 coding upstream 662426 10267658 ~ 10278333 (-)
LOC103029242 LOC103029242,LOC108414971,LOC108256685 coding upstream 723858 10329090 ~ 10340189 (-)
G17646 NA non-coding downstream 1497 9602787 ~ 9603419 (-)
G17640 NA non-coding downstream 41648 9563051 ~ 9563268 (-)
G17589 NA non-coding downstream 162149 8998100 ~ 9442767 (-)
G17600 NA non-coding downstream 446938 9068035 ~ 9157978 (-)
G17599 NA non-coding downstream 496488 9104564 ~ 9108428 (-)
G17661 NA non-coding upstream 208479 9813711 ~ 9814683 (-)
G17663 LOC107746320 non-coding upstream 209697 9814929 ~ 9818329 (-)
G17681 NA non-coding upstream 241992 9847224 ~ 9847460 (-)
G17690 NA non-coding upstream 327683 9932915 ~ 9933135 (-)
G17757 NA non-coding upstream 347131 9952363 ~ 9954113 (-)
G17638 NA other downstream 42191 9562427 ~ 9562725 (-)
LOC111188216 NA other downstream 718599 8861134 ~ 8886317 (-)
LOC103026934 ahrr,LOC108431062 other downstream 1597296 7924929 ~ 8007620 (-)
sec61b sec61b,LOC102796100 other downstream 3060641 6534859 ~ 6544275 (-)
LOC111191940 NA other downstream 3241911 6354945 ~ 6363005 (-)
mak mak other upstream 389913 9995145 ~ 10009151 (-)
G17792 NA other upstream 641443 10246675 ~ 10247318 (-)
LOC103047439 zswim7,LOC107665024,LOC107712139,LOC107740465,LOC107688637,LOC107731017 other upstream 1410797 11016029 ~ 11080184 (-)
LOC107197924 NA other upstream 1471006 11076238 ~ 11083799 (-)
abr abr,si:ch211-253h3.1,LOC107665039,LOC107712163,LOC107688618,LOC107731041,LOC103375456,LOC106567975 other upstream 1480248 11085480 ~ 11334518 (-)

Expression


Co-expression Network