G17739


Basic Information

Item Value
gene id G17739
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 10259018 ~ 10259526 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU23926
taatttagaggtaatctgacaaagactttaggagcagtttaaatgagtttgtgaaaaaaagtgtaaaaatattacaaaatccaatatggccgacttcctgttgggcggagctaatacaaaccaattgcaaatatgtgcagagtCATAGTATCTAcgctcctaccaaaatttgagaagattagacaaattgtgacacatccacagctaatttattaaacgaatgaattagggggcgctatagagtccgctagctacacatgaaaaaattatcacaatatttgtaaagtgtttttagatcttatggaatctgacagttttcaagagtttttgagcatttccgtaatgtcaaatatgcattgaaacctaggtggcgctatagagccaatgaaatatgtatatatgaaatttcaatttttaatcaaaggaccgcttaaatcaagcaggcctgtaaagtttcgtgagtgttcaacctgtttaacctcctcaaacacctaccaacaccagaatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23926 True 509 lncRNA 0.25 1 10259018 10259526

Neighbor

gene id symbol gene type direction distance location
LOC103027767 gnal,LOC108426578,LOC106590334,LOC106579638 coding upstream 31686 10144084 ~ 10227332 (+)
sycp2l NA coding upstream 157611 10080591 ~ 10101407 (+)
tmem14c tmem14c,tm14c,tmem14ca,LOC107671380 coding upstream 263978 9991406 ~ 9995040 (+)
LOC103024812 NA coding upstream 269500 9980606 ~ 9989518 (+)
eef1e1 eef1e1,LOC107664672,LOC107572674,LOC107730010,LOC107678551 coding upstream 304889 9937761 ~ 9954129 (+)
LOC103028717 impa1,LOC103028717,LOC107085441,LOC100708678,LOC102192612,LOC102777947,LOC101479609,LOC103356684,LOC108415234 coding downstream 80968 10340494 ~ 10350048 (+)
LOC103044085 LOC105902693,LOC107570661 coding downstream 257895 10517421 ~ 10805698 (+)
c3h11orf54 cunh11orf54,c28h11orf54,zgc:85789,LOC107709398,LOC107587676,LOC107690214,LOC107685814 coding downstream 1129398 11388924 ~ 11394347 (+)
spata22 NA coding downstream 1137361 11396887 ~ 11401496 (+)
LOC111194924 NA coding downstream 1348664 11608190 ~ 11619687 (+)
G17735 NA non-coding upstream 11697 10246584 ~ 10247321 (+)
G17709 NA non-coding upstream 250223 10007790 ~ 10008795 (+)
G17685 NA non-coding upstream 370640 9887866 ~ 9888378 (+)
G17679 NA non-coding upstream 412717 9846014 ~ 9846301 (+)
G17643 NA non-coding upstream 672146 9586658 ~ 9586872 (+)
G17742 NA non-coding downstream 9995 10269521 ~ 10270290 (+)
G17751 NA non-coding downstream 50539 10310065 ~ 10330395 (+)
G17812 NA non-coding downstream 123171 10382697 ~ 10382969 (+)
G17821 NA non-coding downstream 153393 10412919 ~ 10413158 (+)
G17828 NA non-coding downstream 171374 10430900 ~ 10431296 (+)
G17443 NA other upstream 1308859 8916586 ~ 8950159 (+)
LOC111191978 NA other upstream 1355014 8899940 ~ 8904004 (+)
LOC111191971 NA other upstream 1359373 8891244 ~ 8899645 (+)
G17414 NA other upstream 1542231 8675619 ~ 8716787 (+)
LOC103041197 NA other upstream 2074181 8168839 ~ 8184837 (+)
G17745 NA other downstream 21698 10281224 ~ 10281976 (+)
G17904 abr other downstream 918382 11177908 ~ 11190080 (+)
G18332 LOC107710578 other downstream 2708037 12967563 ~ 12975106 (+)
G18386 gjd1a,LOC103027887,LOC108437049,LOC107700241,LOC107548473,LOC107746368 other downstream 2785305 13044831 ~ 13074453 (+)
LOC103028202 h3f3b,LOC105891059,LOC107572204,LOC105909691,LOC101073377,LOC105888650,LOC107388308 other downstream 2837184 13096710 ~ 13128508 (+)

Expression


Co-expression Network