Gene
RNA
| Item | Value |
|---|---|
| gene id | G57228 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 10020081 ~ 10020301 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU65209 | True | 221 | lncRNA | 0.27 | 1 | 10020081 | 10020301 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_09908895_09911939 | HAO2, HAOX2 | coding | downstream | 108043 | 9908583 ~ 9912038 (-) |
| CI01000009_09900049_09906784 | KLH13 | coding | downstream | 113297 | 9899709 ~ 9906784 (-) |
| CI01000009_09895304_09897877 | HSD3B1 | coding | downstream | 122077 | 9895156 ~ 9898004 (-) |
| CI01000009_09884586_09891558 | PLA1A | coding | downstream | 128523 | 9884580 ~ 9891558 (-) |
| CI01000009_09866875_09870401 | NA | coding | downstream | 149617 | 9866565 ~ 9870464 (-) |
| CI01000009_10089124_10102162 | WDR3 | coding | upstream | 67636 | 10087937 ~ 10102162 (-) |
| CI01000009_10137314_10138474 | MAN1A2, FAM46C | coding | upstream | 116790 | 10137091 ~ 10139525 (-) |
| CI01000009_10149267_10242850 | MGC130950, MAN1A2.L, MAN1A2 | coding | upstream | 128966 | 10149267 ~ 10242850 (-) |
| CI01000009_10250936_10259244 | TRIM45 | coding | upstream | 230595 | 10250896 ~ 10259244 (-) |
| CI01000009_10261399_10263994 | VTCN1 | coding | upstream | 240299 | 10260600 ~ 10263994 (-) |
| G57226 | NA | non-coding | downstream | 16585 | 10001161 ~ 10003496 (-) |
| G57219 | NA | non-coding | downstream | 33590 | 9986073 ~ 9986491 (-) |
| G57210 | NA | non-coding | downstream | 55525 | 9964330 ~ 9964556 (-) |
| G57189 | NA | non-coding | downstream | 104622 | 9915188 ~ 9915459 (-) |
| G57235 | NA | non-coding | upstream | 27116 | 10047417 ~ 10134720 (-) |
| G57234 | NA | non-coding | upstream | 61817 | 10082118 ~ 10136770 (-) |
| G57247 | NA | non-coding | upstream | 95489 | 10115790 ~ 10135432 (-) |
| G57245 | NA | non-coding | upstream | 122309 | 10142610 ~ 10144550 (-) |
| G57240 | NA | non-coding | upstream | 170309 | 10190610 ~ 10199419 (-) |
| CI01000009_08858198_08860555 | NA | other | downstream | 1159518 | 8856310 ~ 8860563 (-) |
| G55814 | NA | other | downstream | 1592069 | 8425821 ~ 8428012 (-) |
| G53515 | NA | other | downstream | 4514833 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 5788612 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 6758124 | 3261038 ~ 3262843 (-) |
| G59097 | NA | other | upstream | 2267916 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 3955087 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 4013263 | 14033564 ~ 14037873 (-) |
| G59811 | NA | other | upstream | 4842096 | 14862397 ~ 14887464 (-) |
| G59941 | NA | other | upstream | 5111803 | 15132104 ~ 15132503 (-) |
