G18037


Basic Information

Item Value
gene id G18037
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 11684987 ~ 11685391 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU24378
gtcatctcacgcctcgactactgcaatgccctgctaactggcctcccggcctgtgtagtaaaaccactccagatgatccagaacgcagcagcacgtctggtcttcaaccaaccaaaacgggcacatgtcaccccgctgctcattgagctccactggctaccagttgatgctcgcatcaaattcaaaactcttacaatcgcctacaaggtgatgacagaacaggctccttcctacctgcactcgctcctgaaggcttacgctacctcccggccgctgcgctcctccaatgaacgtcgcctcgctttgccaaacattcacacaaagcaatccagactgttctcatacagagttccccaatggtggaacaaactaccttccactaccagatcaggagaatctctcgct

Function

NR:

description
PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24378 True 405 TUCP 0.53 1 11684987 11685391

Neighbor

gene id symbol gene type direction distance location
LOC103040613 hnrnpul1l,hnrnpul1,LOC108413504,LOC108259896 coding downstream 20746 11652941 ~ 11664241 (-)
sympk sympk,LOC107681888 coding downstream 34437 11638731 ~ 11650550 (-)
LOC103042846 NA coding downstream 48769 11630788 ~ 11636218 (-)
LOC103043164 LOC103043164,LOC108428299,LOC108259900 coding downstream 59296 11620209 ~ 11625691 (-)
LOC103044795 ehd2a,LOC108427007,LOC108260244,LOC107595479,LOC107685737,LOC107712157,LOC107740518,LOC107587717 coding downstream 78961 11596368 ~ 11606026 (-)
rasl10b rasl10b,LOC107685904,LOC107595522,LOC107681887,LOC107710719,LOC107587740 coding upstream 3555 11688946 ~ 11715524 (-)
ap2b1 ap2b1,LOC107685655,LOC100380745 coding upstream 35952 11721343 ~ 11777314 (-)
bckdk bckdk,LOC107681895,LOC107685622,LOC106603456 coding upstream 112713 11798104 ~ 11827347 (-)
lrwd1 NA coding upstream 143713 11829104 ~ 11845696 (-)
alkbh4 alkbh4 coding upstream 159389 11844780 ~ 11847750 (-)
G17929 NA non-coding downstream 537579 11146405 ~ 11147408 (-)
G17921 NA non-coding downstream 624092 11050256 ~ 11060895 (-)
G17859 NA non-coding downstream 829916 10854626 ~ 10855071 (-)
G17845 NA non-coding downstream 1141380 10540478 ~ 10543607 (-)
G17808 NA non-coding downstream 1341724 10342796 ~ 10343263 (-)
G18085 pex12,LOC107681885,LOC107710733,LOC107587685 non-coding upstream 94641 11780032 ~ 11781320 (-)
G18087 NA non-coding upstream 100841 11786232 ~ 11786601 (-)
G18114 NA non-coding upstream 194361 11879752 ~ 11880042 (-)
LOC103023588 NA non-coding upstream 278633 11964024 ~ 11970718 (-)
G18154 NA non-coding upstream 450029 12135420 ~ 12135738 (-)
LOC103044489 LOC103044489,LOC108428292 other downstream 89464 11435436 ~ 11595523 (-)
abr abr,si:ch211-253h3.1,LOC107665039,LOC107712163,LOC107688618,LOC107731041,LOC103375456,LOC106567975 other downstream 350469 11085480 ~ 11334518 (-)
LOC107197924 NA other downstream 601188 11076238 ~ 11083799 (-)
LOC103047439 zswim7,LOC107665024,LOC107712139,LOC107740465,LOC107688637,LOC107731017 other downstream 604803 11016029 ~ 11080184 (-)
G17792 NA other downstream 1437669 10246675 ~ 10247318 (-)
orai2 LOC103026696,LOC108428392,LOC107685638,LOC107595471 other upstream 96121 11781512 ~ 11796151 (-)
LOC111191510 LOC108414110,LOC108437066,LOC108442041,LOC108437065 other upstream 1081708 12767099 ~ 12780581 (-)
fxyd2 NA other upstream 1125785 12811176 ~ 12816601 (-)
G18371 tagln,tagl,LOC108437045,LOC103026775,LOC108437046,LOC107749469,LOC107700246,LOC107548469,LOC107746372,LOC107710578 other upstream 1249910 12935301 ~ 13007435 (-)
LOC107197939 NA other upstream 1449326 13134717 ~ 13143478 (-)

Expression


Co-expression Network