G18114


Basic Information

Item Value
gene id G18114
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 11879752 ~ 11880042 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU24481
CTCATGTGTTTGCAGTGCCTGCCGCTTATGTGGTACCCACTGACTCTGACCCTGTGCCTGCGGCTCAGGctgcctctgaccctgtgcctgcgactccggccgcctctgaccctgtgcccgcggctccggctgcctctgaccctgtgcccgctcCCAGAATTAAGTACACGCCCAGGTCGTGTGCTCCCAGACCTGCTCCAAGGTCTTCTGCTCCAGCCCCTCGAACTCTGCCCAGGCTGGCCCCTCAGACTTTGAACTTTACCAGTACTGGGCTCCAGTCTATGTTTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24481 True 291 lncRNA 0.62 1 11879752 11880042

Neighbor

gene id symbol gene type direction distance location
polr2j polr2j,LOC107587688,LOC107595521 coding downstream 26909 11849703 ~ 11852843 (-)
alkbh4 alkbh4 coding downstream 32002 11844780 ~ 11847750 (-)
lrwd1 NA coding downstream 34056 11829104 ~ 11845696 (-)
bckdk bckdk,LOC107681895,LOC107685622,LOC106603456 coding downstream 52405 11798104 ~ 11827347 (-)
ap2b1 ap2b1,LOC107685655,LOC100380745 coding downstream 102438 11721343 ~ 11777314 (-)
castor2 gatsl2,LOC107685562,LOC107595468,LOC107587690,LOC107681899 coding upstream 39426 11919468 ~ 11956437 (-)
doc2b doc2b,LOC108428416,LOC108260357,LOC107681901,LOC107685552,LOC107587692 coding upstream 107384 11987426 ~ 12164184 (-)
trnam-cau NA coding upstream 409641 12289683 ~ 12289755 (-)
trnam-cau_1 NA coding upstream 410114 12290156 ~ 12290228 (-)
trnam-cau_2 NA coding upstream 410817 12290859 ~ 12290931 (-)
G18087 NA non-coding downstream 93151 11786232 ~ 11786601 (-)
G18085 pex12,LOC107681885,LOC107710733,LOC107587685 non-coding downstream 98432 11780032 ~ 11781320 (-)
G17929 NA non-coding downstream 732344 11146405 ~ 11147408 (-)
G17921 NA non-coding downstream 818857 11050256 ~ 11060895 (-)
G17859 NA non-coding downstream 1024681 10854626 ~ 10855071 (-)
LOC103023588 NA non-coding upstream 83982 11964024 ~ 11970718 (-)
G18154 NA non-coding upstream 255378 12135420 ~ 12135738 (-)
G18164 NA non-coding upstream 345767 12225809 ~ 12226389 (-)
G18201 NA non-coding upstream 358023 12238065 ~ 12302552 (-)
G18212 NA non-coding upstream 418509 12298551 ~ 12315182 (-)
orai2 LOC103026696,LOC108428392,LOC107685638,LOC107595471 other downstream 83601 11781512 ~ 11796151 (-)
G18037 NA other downstream 194361 11684987 ~ 11685391 (-)
LOC103044489 LOC103044489,LOC108428292 other downstream 284229 11435436 ~ 11595523 (-)
abr abr,si:ch211-253h3.1,LOC107665039,LOC107712163,LOC107688618,LOC107731041,LOC103375456,LOC106567975 other downstream 545234 11085480 ~ 11334518 (-)
LOC107197924 NA other downstream 795953 11076238 ~ 11083799 (-)
LOC111191510 LOC108414110,LOC108437066,LOC108442041,LOC108437065 other upstream 887057 12767099 ~ 12780581 (-)
fxyd2 NA other upstream 931134 12811176 ~ 12816601 (-)
G18371 tagln,tagl,LOC108437045,LOC103026775,LOC108437046,LOC107749469,LOC107700246,LOC107548469,LOC107746372,LOC107710578 other upstream 1055259 12935301 ~ 13007435 (-)
LOC107197939 NA other upstream 1254675 13134717 ~ 13143478 (-)
LOC107197937 LOC107197937 other upstream 1264731 13144773 ~ 13161124 (-)

Expression


Co-expression Network