Gene
RNA
| Item | Value |
|---|---|
| gene id | G56456 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 10058274 ~ 10058532 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64297 | True | 229 | lncRNA | 0.66 | 2 | 10058274 | 10058532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_09967529_09989449 | TBX15 | coding | upstream | 68807 | 9967384 ~ 9989467 (+) |
| CI01000009_09952526_09962840 | WARS2 | coding | upstream | 93995 | 9952526 ~ 9964279 (+) |
| CI01000009_09878612_09881564 | POPDC2 | coding | upstream | 176380 | 9878612 ~ 9881894 (+) |
| CI01000009_09866000_09866290 | NA | coding | upstream | 191880 | 9865723 ~ 9867040 (+) |
| CI01000009_09853929_09854476 | SAP18 | coding | upstream | 203772 | 9853929 ~ 9856587 (+) |
| CI01000009_10103558_10119209 | GDAP2 | coding | downstream | 45026 | 10103558 ~ 10119220 (+) |
| CI01000009_10268535_10269640 | NA | coding | downstream | 210003 | 10268535 ~ 10269784 (+) |
| CI01000009_10319216_10329706 | PLCD4B | coding | downstream | 260684 | 10319216 ~ 10329836 (+) |
| CI01000009_10338738_10339712 | BCS1L | coding | downstream | 280206 | 10338738 ~ 10339774 (+) |
| CI01000009_10341830_10347798 | CYP27A1.2, CYP27A1.4, CYP27A7 | coding | downstream | 283298 | 10341830 ~ 10348005 (+) |
| G56439 | NA | non-coding | upstream | 37931 | 10020106 ~ 10020343 (+) |
| G56417 | NA | non-coding | upstream | 141101 | 9916869 ~ 9917173 (+) |
| G56386 | NA | non-coding | upstream | 143880 | 9908693 ~ 9914394 (+) |
| G56384 | NA | non-coding | upstream | 151498 | 9899687 ~ 9906776 (+) |
| G56412 | NA | non-coding | upstream | 160029 | 9897727 ~ 9898245 (+) |
| G56392 | NA | non-coding | downstream | 199996 | 10258528 ~ 10259660 (+) |
| G56507 | NA | non-coding | downstream | 224541 | 10283073 ~ 10284524 (+) |
| G56509 | NA | non-coding | downstream | 230318 | 10288850 ~ 10289512 (+) |
| G56540 | NA | non-coding | downstream | 231927 | 10290459 ~ 10292559 (+) |
| G56393 | NA | non-coding | downstream | 244950 | 10303482 ~ 10304485 (+) |
| G56100 | NA | other | upstream | 927988 | 9129300 ~ 9130286 (+) |
| G53651 | NA | other | upstream | 3809882 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 4125473 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 4519220 | 5522242 ~ 5540638 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 1702254 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 1875410 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 2374026 | 12432538 ~ 12436017 (+) |
| G57682 | NA | other | downstream | 2766937 | 12825469 ~ 12892339 (+) |
| G57691 | NA | other | downstream | 2847912 | 12906444 ~ 12918465 (+) |
