G56633



Basic Information


Item Value
gene id G56633
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 10721894 ~ 10722336 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU64492
GCAATAATTAAACTTATAATTTTGATGGCGGATTTTATGGTATGACAAATTAACGTTAGTGATTAGACTGTACAGAAATTGAAATCTACAGGTAACGCTAATACACACTAAATACACAGTCACACAATGCTGATGTTGTTAACATTAACAATTTGAGAACAAAGTATAACAATAATAATAATTTGCACGGTTTGACGTGATATGAGCTAAGCGATCGTTAGATTTAATCACCAATGGCAGCGCGATTTACTGTAATGCTTTTTTACCTTCAGTTGGTCAGAACAAAAGTGGCAGACATGTTACTTACTTGTTCAGATGACATTCTCCAGTGAAAATTCTTATTTTGGTCATACTTCAAGACTACAATCTGTGATTCTGAAGTATAGTATCCACACCAGTGTGGTGACTGACAGCAAACATTGGATTCATACGCACTGAGGAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU64492 True 443 lncRNA 0.35 1 10721894 10722336

Neighbor


gene id symbol gene type direction distance location
CI01000009_10644080_10691030 CPS1 coding upstream 29844 10644080 ~ 10692050 (+)
CI01000009_10583435_10617169 MAP2 coding upstream 104725 10583435 ~ 10617169 (+)
CI01000009_10555555_10560050 NA coding upstream 161496 10554350 ~ 10560398 (+)
CI01000009_10491868_10508777 NA coding upstream 212885 10491401 ~ 10509009 (+)
CI01000009_10477699_10485965 NA coding upstream 234541 10476658 ~ 10487353 (+)
CI01000009_11342784_11347580 NA coding downstream 620448 11342784 ~ 11348827 (+)
CI01000009_11434018_11455253 NA coding downstream 711456 11433792 ~ 11455635 (+)
CI01000009_11493236_11526914 VWC2L coding downstream 770900 11493236 ~ 11526914 (+)
CI01000009_11669960_11702667 HIBCH coding downstream 947624 11669960 ~ 11703539 (+)
CI01000009_11711277_11714191 MSTN, GDF-8, MSTNB coding downstream 988824 11711160 ~ 11714694 (+)
G56628 NA non-coding upstream 6006 10715610 ~ 10715888 (+)
G56594 NA non-coding upstream 25881 10695726 ~ 10696013 (+)
G56548 NA non-coding upstream 83442 10631098 ~ 10638452 (+)
G56567 NA non-coding upstream 188169 10518816 ~ 10533725 (+)
G56579 NA non-coding upstream 209254 10512413 ~ 10512640 (+)
G56695 NA non-coding downstream 108656 10830992 ~ 10860154 (+)
G56725 NA non-coding downstream 164103 10886439 ~ 10926871 (+)
G56744 NA non-coding downstream 197524 10919860 ~ 10932759 (+)
G56784 NA non-coding downstream 262908 10985244 ~ 11256970 (+)
G56843 NA non-coding downstream 388901 11111237 ~ 11114663 (+)
CI01000009_09853929_09854476 SAP18 other upstream 865307 9853929 ~ 9856587 (+)
G56100 NA other upstream 1591608 9129300 ~ 9130286 (+)
G53651 NA other upstream 4473502 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 4789093 5931718 ~ 5943899 (+)
G53388 NA other upstream 5182840 5522242 ~ 5540638 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other downstream 1038450 11761606 ~ 11766944 (+)
G57811 NA other downstream 1211606 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 1710222 12432538 ~ 12436017 (+)
G57682 NA other downstream 2103133 12825469 ~ 12892339 (+)
G57691 NA other downstream 2184108 12906444 ~ 12918465 (+)

Expression



Co-expression Network