Gene
RNA
| Item | Value |
|---|---|
| gene id | G56695 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 10830992 ~ 10860154 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64556 | True | 969 | lncRNA | 0.51 | 9 | 10830992 | 10860154 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_10644080_10691030 | CPS1 | coding | upstream | 138942 | 10644080 ~ 10692050 (+) |
| CI01000009_10583435_10617169 | MAP2 | coding | upstream | 213823 | 10583435 ~ 10617169 (+) |
| CI01000009_10555555_10560050 | NA | coding | upstream | 270594 | 10554350 ~ 10560398 (+) |
| CI01000009_10491868_10508777 | NA | coding | upstream | 321983 | 10491401 ~ 10509009 (+) |
| CI01000009_10477699_10485965 | NA | coding | upstream | 343639 | 10476658 ~ 10487353 (+) |
| CI01000009_11342784_11347580 | NA | coding | downstream | 482630 | 11342784 ~ 11348827 (+) |
| CI01000009_11434018_11455253 | NA | coding | downstream | 573638 | 11433792 ~ 11455635 (+) |
| CI01000009_11493236_11526914 | VWC2L | coding | downstream | 633082 | 11493236 ~ 11526914 (+) |
| CI01000009_11669960_11702667 | HIBCH | coding | downstream | 809806 | 11669960 ~ 11703539 (+) |
| CI01000009_11711277_11714191 | MSTN, GDF-8, MSTNB | coding | downstream | 851006 | 11711160 ~ 11714694 (+) |
| G56633 | NA | non-coding | upstream | 108656 | 10721894 ~ 10722336 (+) |
| G56628 | NA | non-coding | upstream | 115104 | 10715610 ~ 10715888 (+) |
| G56594 | NA | non-coding | upstream | 134979 | 10695726 ~ 10696013 (+) |
| G56548 | NA | non-coding | upstream | 192540 | 10631098 ~ 10638452 (+) |
| G56567 | NA | non-coding | upstream | 297267 | 10518816 ~ 10533725 (+) |
| G56725 | NA | non-coding | downstream | 26285 | 10886439 ~ 10926871 (+) |
| G56744 | NA | non-coding | downstream | 59706 | 10919860 ~ 10932759 (+) |
| G56784 | NA | non-coding | downstream | 125090 | 10985244 ~ 11256970 (+) |
| G56843 | NA | non-coding | downstream | 251083 | 11111237 ~ 11114663 (+) |
| G57556 | NA | non-coding | downstream | 509834 | 11369988 ~ 11370472 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | upstream | 974405 | 9853929 ~ 9856587 (+) |
| G56100 | NA | other | upstream | 1700706 | 9129300 ~ 9130286 (+) |
| G53651 | NA | other | upstream | 4582600 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 4898191 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 5291938 | 5522242 ~ 5540638 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 900632 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 1073788 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 1572404 | 12432538 ~ 12436017 (+) |
| G57682 | NA | other | downstream | 1965315 | 12825469 ~ 12892339 (+) |
| G57691 | NA | other | downstream | 2046290 | 12906444 ~ 12918465 (+) |
