Gene
RNA
| Item | Value |
|---|---|
| gene id | G56843 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 11111237 ~ 11114663 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64725 | True | 620 | lncRNA | 0.50 | 2 | 11111237 | 11114663 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_10644080_10691030 | CPS1 | coding | upstream | 419187 | 10644080 ~ 10692050 (+) |
| CI01000009_10583435_10617169 | MAP2 | coding | upstream | 494068 | 10583435 ~ 10617169 (+) |
| CI01000009_10555555_10560050 | NA | coding | upstream | 550839 | 10554350 ~ 10560398 (+) |
| CI01000009_10491868_10508777 | NA | coding | upstream | 602228 | 10491401 ~ 10509009 (+) |
| CI01000009_10477699_10485965 | NA | coding | upstream | 623884 | 10476658 ~ 10487353 (+) |
| CI01000009_11342784_11347580 | NA | coding | downstream | 228121 | 11342784 ~ 11348827 (+) |
| CI01000009_11434018_11455253 | NA | coding | downstream | 319129 | 11433792 ~ 11455635 (+) |
| CI01000009_11493236_11526914 | VWC2L | coding | downstream | 378573 | 11493236 ~ 11526914 (+) |
| CI01000009_11669960_11702667 | HIBCH | coding | downstream | 555297 | 11669960 ~ 11703539 (+) |
| CI01000009_11711277_11714191 | MSTN, GDF-8, MSTNB | coding | downstream | 596497 | 11711160 ~ 11714694 (+) |
| G56744 | NA | non-coding | upstream | 178478 | 10919860 ~ 10932759 (+) |
| G56725 | NA | non-coding | upstream | 184366 | 10886439 ~ 10926871 (+) |
| G56695 | NA | non-coding | upstream | 251083 | 10830992 ~ 10860154 (+) |
| G56633 | NA | non-coding | upstream | 388901 | 10721894 ~ 10722336 (+) |
| G56628 | NA | non-coding | upstream | 395349 | 10715610 ~ 10715888 (+) |
| G57556 | NA | non-coding | downstream | 255325 | 11369988 ~ 11370472 (+) |
| G57557 | NA | non-coding | downstream | 256732 | 11371395 ~ 11371768 (+) |
| G57564 | NA | non-coding | downstream | 271691 | 11386354 ~ 11386583 (+) |
| G57567 | NA | non-coding | downstream | 282340 | 11397003 ~ 11397339 (+) |
| G57589 | NA | non-coding | downstream | 316681 | 11431344 ~ 11431637 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | upstream | 1254650 | 9853929 ~ 9856587 (+) |
| G56100 | NA | other | upstream | 1980951 | 9129300 ~ 9130286 (+) |
| G53651 | NA | other | upstream | 4862845 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 5178436 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 5572183 | 5522242 ~ 5540638 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 646123 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 819279 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 1317895 | 12432538 ~ 12436017 (+) |
| G57682 | NA | other | downstream | 1710806 | 12825469 ~ 12892339 (+) |
| G57691 | NA | other | downstream | 1791781 | 12906444 ~ 12918465 (+) |
